Schistosoma haematobium (urinary blood fluke): MS3_00008678
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Entry
MS3_00008678 CDS
T05004
Symbol
PKD2_1
Name
(RefSeq) TRP-like ion channel Pkd2
KO
K04986
polycystin 2
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shx03037
]
MS3_00008678 (PKD2_1)
04040 Ion channels [BR:
shx04040
]
MS3_00008678 (PKD2_1)
Cilium and associated proteins [BR:
shx03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
MS3_00008678 (PKD2_1)
Ion channels [BR:
shx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
MS3_00008678 (PKD2_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Motif
Other DBs
NCBI-GeneID:
24589630
NCBI-ProteinID:
XP_051065640
UniProt:
A0A922IKQ4
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All DBs
Position
6:17466853..17499343
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AA seq
752 aa
AA seq
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MEDVDYSVKNRKSQVTNLNTVKFEDQGQLKTNSNILNNSKNITNEKLRKSSVAILRNRFF
RAIWTTRNTVNATDRRVFISTTLRELLLYIVFLTLLLIIALTTLNSMTYFYNTSIYNRFV
VTDGSTTSDSPQAFQNIHDHTAMWNYINGQLLNSLYWDAWYNRLNVSFNEKDFIAHDNKV
LGVARLRQLRVDPSQCDIPKQMRGVIEKCYPVYSTKARFTKSIQIQGNITPIYTKNAWNF
SDSHVTGATSYSAPYGYYDGSGYIQDLSRSNDETVAILNELFQGQWIDQSTRALFIDFTI
YNANVNIFVIVKIIFEMPESGGLFGSTIVQPVRLFRYQTVTDYFVLVCEIVYLVFLAYYI
IEEILEFSVKRWRYFINIWNLMDITMIVASIICAAFLIYSTIIVSNNMSSLISDVSSYPN
FDYLAYWYSHHIRSMAICVFLGIIKIFKYLTIDRSLNQLTRTMSVAAYDLLGFLIMFCIV
YFAFAQLGYLAFSARTLAYSSFTQTTYSLFRIMVGDIDFPSILKAHPVLGPIFFVTFVFF
VFFVLLNMFLAIIDESYKTTKAELIQQKNDVTLGHILKKKAKDLAKRVQKKRSKSIVRIL
REYGLMGKEKLPYEDYRQALKSHGYSEPEIFTTFVKYDEDGDNNLDLTEQQQLAYEIDLG
VIYKIGEPVDEGIGTDEDSNGNSVKDEDNYVDPEDYNELIQNVDLMEATLVSIITRIDEL
LASLEQIEIAKREHRIQLSGIIKDMSRTLQFK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgttgattattctgtgaaaaatcgtaaatcacaagtaacgaatttgaacaca
gtaaagtttgaagatcaaggtcaattgaagacaaattctaatattctaaataattcgaaa
aacataacaaatgaaaagctaagaaaatcgtcagtagcaattctacgtaatcgatttttt
cgcgccatctggacaacgcgtaacacagtcaatgccactgatcgaagagtattcataagt
actacactaagagaattactactgtatatagtgtttttgacattactactgataattgct
ttgacgactttaaattcaatgacatatttctacaacacaagtatttacaatcgattcgta
gtaacggacggttcaacgacatctgatagtccacaagcatttcaaaatattcatgatcat
acagctatgtggaattatatcaatggtcaattattgaattcattatattgggatgcatgg
tataatcgactgaatgtatcattcaatgaaaaagattttattgctcatgataataaagtt
ttaggtgttgcacgtcttcgacagcttagagtagatccatcacaatgtgatatacctaaa
cagatgagaggtgttatagaaaaatgctatcctgtttacagtacaaaagcacgctttaca
aagtcaatacaaatacaaggcaatatcacacctatttacacaaaaaatgcatggaacttt
agtgattctcacgtgacaggagctaccagttattctgcaccatatggttattatgatggt
tccggttatatacaagatttgtccagatcaaatgatgaaactgtagccattttaaatgag
ttatttcaaggtcaatggatagatcaatcaactcgtgcattgtttattgattttacaata
tataacgcaaatgtaaacatatttgttatagtaaaaatcatatttgaaatgcctgaatcg
ggtggattatttggtagcactatagttcaaccagtcagattatttcgttatcaaacagtg
actgattactttgttttagtatgtgaaattgtgtatttggtttttcttgcctattatatt
attgaagagatacttgagttttcagttaaacgttggagatattttataaatatttggaac
ttaatggatattacaatgattgtagccagtataatatgtgcagcatttttaatatatagt
actattattgtttcaaacaatatgtcctcattaattagtgatgtttcgtcttatccaaat
ttcgattatcttgcttattggtatagtcaccatataagatcaatggcaatttgtgtattt
cttggaataatcaagatcttcaaatatttaacgattgatcgttcattaaatcaattaaca
agaacaatgagtgtagctgcttatgatttactgggatttttaattatgttttgtattgtg
tatttcgcgtttgctcaattgggttatttagcatttagtgcaagaacattagcgtatagt
tcatttactcaaacaacttattcattatttcgtataatggttggtgatatcgactttcca
tccattctaaaagctcatcctgttttaggaccaatattttttgtgacttttgttttcttt
gtattttttgttttattaaatatgtttcttgctattattgatgaatcgtataaaacaaca
aaagctgaattaattcaacagaaaaatgatgtaacattggggcatatacttaaaaaaaaa
gctaaagatttagctaaaagagttcaaaagaaacgatctaaatcgattgttcgtatatta
cgagaatatggattgatgggtaaagaaaaattaccctatgaagattatcgtcaagcatta
aaaagccatggatatagtgaaccagaaatttttacaacttttgtgaaatacgatgaagat
ggtgataataatttagatctaacagaacaacaacaattagcttatgaaattgacttgggt
gtaatctataaaattggagaaccagttgatgaagggattgggacagatgaagattccaat
ggaaattctgttaaggatgaagataattatgttgatcctgaagactataatgaattaatc
caaaatgttgatcttatggaagctacacttgtttcaattattacacgtatagatgaatta
ttagctagcctagaacaaattgagatagcaaaacgtgaacatagaatacaacttagtgga
ataattaaagatatgtctcgaacactccagtttaaataa
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