Schistosoma haematobium (urinary blood fluke): MS3_00008789
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Entry
MS3_00008789 CDS
T05004
Symbol
EMG1_1
Name
(RefSeq) 18S rRNA pseudouridine methyltransferase, variant 2
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MS3_00008789 (EMG1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shx03009
]
MS3_00008789 (EMG1_1)
Enzymes [BR:
shx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
MS3_00008789 (EMG1_1)
Ribosome biogenesis [BR:
shx03009
]
Eukaryotic type
90S particles
Other 90S particles
MS3_00008789 (EMG1_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
DUF1264
Motif
Other DBs
NCBI-GeneID:
24589256
NCBI-ProteinID:
XP_012793111
UniProt:
A0A094ZKD1
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All DBs
Position
6:complement(21919904..21926465)
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AA seq
233 aa
AA seq
DB search
MPENDSVRLYILLDQASLESVKASSGKEFQLLNPDKHKDRILKAGVDVATVRPDITHQCL
LMLLDSPLNRVGKLQVFIRTRKNVIIEVNPKTRIPRTFDRFCGLMVQLLHKLSIHAEGGN
REKLLKIVKNPVTRHFPIGAPVITMSFSSKEQIKPIQLAEETQKPNPQSVVIVIGALAHG
SVVDTCKEFTQRTVSISNFPLSAAQTCARICTAFEEVWCVEDILSGVKTQIET
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaacgattcagtgagattgtacattttgcttgaccaggcttcactagagtca
gttaaggcatctagtggaaaagagttccaactacttaatcctgataaacataaagatcgg
attttaaaggccggtgttgatgttgccacagttcgtccagatattacccatcaatgtcta
ctcatgctacttgatagcccattaaaccgagttggcaaactgcaggtttttattcgaaca
agaaaaaatgtgataattgaagtgaatcctaaaacaagaataccacgtacattcgatcga
ttttgtgggcttatggtgcaacttttacacaaactctcaatacatgctgaaggtggcaat
cgtgagaaactattaaaaatcgtcaaaaaccctgtaacacgacactttccaatcggtgct
ccagttattacaatgtcgttttcatcaaaggaacaaattaaaccaattcaactagctgaa
gagacacagaaacctaaccctcaatcagttgttattgttattggtgcattagcccatggt
tcagttgtcgatacttgtaaagagtttacacaacgtacagtcagtattagtaactttcct
ttatcggccgctcagacatgcgctcgaatatgtactgcattcgaagaagtatggtgtgtt
gaagatattttaagtggagtaaaaacgcaaatagaaacctga
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