Schistosoma haematobium (urinary blood fluke): MS3_00008874
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Entry
MS3_00008874 CDS
T05004
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP domain-containing protein
KO
K12842
U2-associated protein SR140
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00008874 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shx03041
]
MS3_00008874 (U2SURP)
Spliceosome [BR:
shx03041
]
Complex A
U2 snRNP components
U2 related factors
MS3_00008874 (U2SURP)
Complex B
MS3_00008874 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
RRM_7
DUF3348
Motif
Other DBs
NCBI-GeneID:
24596775
NCBI-ProteinID:
XP_051073893
UniProt:
A0A922LVZ7
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Position
1:complement(36139946..36158341)
Genome browser
AA seq
1242 aa
AA seq
DB search
FTCDIHGAICERMKSNEKSGGHSYSLVKSSRSSSKRNDFDQKKRKEEEHTQQVFEEFVAT
FEEPSKSRAWVKGGVVNPSSGSSEDTKGTGRIYRPVSKLDSKLNKTEEQNKADFKKSTEK
PPALGKRKGQEQKKSKLEQFKEELKLIQQQREQRHALRQGRNQLSTQSDLDLSDVGMRNR
EYRRGSSNNQGGDSGMGFHNTVSTPPSFYSKRSQNDRHDVDYPYDYDGDRTTTNLFLGNL
NPKMTEQQLCEAFGRYGPLASVKIMWPRTEEERSRGRNCGFVAFMNRKDGERALDNIRGK
ELMGFEMKLGWGKSVPIPLYPVYIPPALLELVKPPPPSGLPFNAQPREWLKSFRLAIKER
AKLITDGADGDSAPPPPAPDRKPYDINKMSSEELTEVLREAVVKVVMPSDRSILALIHRM
IEFVVLEGPQFEAAVMHREANNPMFKFLFDYQSSDHVYYRWKLWSVLHGESVTKWRTEEF
RMFEGGPLWRPPPVNLFSGGMPEDLVEEDDYPYAPGYVPPPSGRRRESEDLQEEIRLEAA
AASRRCGLTEAQRGRFTQMLEDLEPCRIKIGEVMVWCLEHADSASDIALCIVDSVAPNSN
FISNYLDKETNSADENPISDLKSDQDSTEHEKSQSISINKLVARLFLASDILYNSSAKVP
NASFFRKCFETCLPDMFKNLNLHYKNVEGKLKAEQLKQKVMLCFRAWEDWAVYPNEFLIK
LQNIFLGLVSEAVDYEADLSGIPLNLIEDEQNQDLSKKIGFLNPDVEVLESQPLVQYDGD
PLDVDGSPLDNEDDRSPSPVRPKNSQLSATTTEDEVKPSGDTSNRLFVPSKWETVEATEP
EALTVASIWESTSVLDTKKDQTISKSSDNMQNTPSHLQNQPNGLNKGAFLPSEVVNGIPL
DTSRWSNNASTNKVDDDVDGEPLPILGGLVAYDDEDAASPGASESSLSPVPVSQIPCPTP
VTSATSHVSSTPSSTSTTTPVSEERRAILREVELKVLKYQDELEASRKGDKTITDEAINK
QIQRYRERLLESLVENEHSVHKKGHKSVHRNKSKPSKSVKEKSGLTPHQSKYQSRGRDMS
SSPTRRNSRDRSPPRSFRDRDRPRRRHASPSGSLGPGDWSTYNSPSMRMDSRNSSERRRT
SASAWEPDSTEDEINYSTHLEDVEEGEATEDDDAAAFTSNQSHSITPKKKHVPHKSNRKR
HRSRSPDPVAAHNRHSHRSRTPSPSRKKVHSSDSASRSLKRK
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
ttcacttgcgatattcatggcgccatctgtgaaagaatgaagtccaacgagaaatctggt
ggacacagttatagtctggtcaaatctagtagatcatcttcaaagaggaatgattttgat
cagaagaagaggaaagaggaagagcatacacagcaagtgtttgaggagtttgtcgccact
tttgaggagccttctaaatcccgagcgtgggttaagggtggtgtcgtcaatccgtcttca
ggttcctcagaggatacgaaggggactggccgcatatacagacctgtctcgaagttggat
tctaaattaaataaaactgaggaacagaataaagcagatttcaagaaatccactgaaaag
cctccagctctcggcaagcgcaagggacaagaacaaaagaaatctaaactagaacagttc
aaagaggagctcaaattgattcagcaacagagagagcaaagacatgcattaagacaaggc
agaaatcaactctctacacagtctgatctagatctttccgatgttggtatgcgtaatcgg
gaatatcggaggggttcttccaataatcagggtggagattcaggcatgggttttcacaac
acagtgtcgacaccaccgagcttttattctaaacgcagccaaaatgatcgtcatgatgtt
gattacccatatgattacgatggtgatagaacaacgacaaatctttttcttgggaatcta
aaccctaaaatgacagagcaacagttgtgtgaggctttcggtcgttatggtcctcttgca
agtgtcaaaataatgtggcctaggacagaagaagaacgttcaagaggaagaaactgtgga
tttgttgctttcatgaatagaaaagatggcgaacgagccctcgacaacattagagggaaa
gaacttatgggatttgaaatgaaactaggttgggggaaaagcgtcccgatccctttatac
ccagtttacattcctccggcattgcttgagttagttaaaccacctcctccaagtggacta
ccattcaatgcccaacctagagagtggttgaagtcatttcgcttggcgatcaaggagcga
gccaaacttataactgatggtgcagacggtgacagcgcgccaccacccccagctccagac
cgaaagccatacgatataaataaaatgtcgagtgaagaacttactgaagttctccgtgaa
gcggtggttaaggtcgttatgccaagtgatagatccatacttgctctgattcatcgcatg
attgaatttgtcgtccttgaaggtcctcaattcgaggccgcggttatgcaccgggaagca
aataatcctatgtttaaattcctttttgattatcagtcttcggatcatgtatactatcgc
tggaagttatggtctgttctacatggcgaaagtgtaaccaaatggcgtacagaagaattt
cgaatgtttgaaggtggtccgctttggcgtccccctcctgttaatttattctctggtggc
atgccagaagaccttgttgaagaagatgattatccttacgccccaggatatgttccgccg
ccttctggaagaagacgtgaatctgaagacttgcaagaagaaattcgtttagaagctgct
gccgcttctcgtcgttgtggtttaacagaggcacaacgaggtcggtttactcaaatgctg
gaggatcttgaaccctgtcgcattaaaataggtgaggttatggtgtggtgtttggaacac
gcggattctgcctccgatatcgccttgtgtatagttgattcagttgctccaaattcgaat
ttcatttcaaattatttggataaagaaacaaattcagccgatgaaaatcctatctcagac
ttgaaatccgaccaggattctacagagcatgaaaaatctcaatctataagcataaataaa
ttggtcgctcgtttgttcttggcttctgatatactatataattcgtcagctaaagttcca
aacgcttctttctttcgaaagtgttttgaaacttgcttaccagatatgttcaaaaacctg
aatttacattataaaaatgtagagggaaaacttaaagctgaacaattgaagcaaaaagtc
atgctttgtttccgtgcgtgggaagattgggccgtatatccaaatgaattcctcatcaag
ttgcagaatatattcttggggctggtgtcggaggctgttgactatgaagccgacctgtcg
ggtattccattaaatttgattgaagatgagcaaaatcaagatttgtcaaaaaaaatagga
tttttaaatccggatgtcgaggttctagaaagccaaccattagttcaatatgatggagat
cccttggatgttgatggtagtcctttagataatgaagatgatcggtctccttcaccagtt
cgacctaagaattctcagctcagtgcaactacaacggaggatgaagtaaaaccatctggg
gatacttctaatcgtttatttgttccaagcaaatgggaaactgttgaagctactgaacca
gaggcattaacagtcgcaagtatatgggaatccacctctgttttagatacgaaaaaagac
caaactatctccaagtccagtgacaacatgcagaatactcctagtcaccttcaaaaccag
ccgaatggtttaaataagggggcgtttcttccttctgaagttgttaatggaatcccactt
gatacaagtcgatggagtaacaatgcttcaacaaataaagtagacgatgatgtagacgga
gaaccattacccattttaggaggacttgtggcttatgatgacgaagatgctgccagtcca
ggtgcgagcgaatctagtctttcacctgtaccagtttctcaaattccttgtcccactccc
gtaacttccgcgacttctcacgtttcttcaacacctagtagtacttcgacaacgacacct
gtttctgaagagcgtcgcgctatcttaagagaagtagaactcaaggtattaaagtatcaa
gatgagttggaggcaagtcgtaaaggagataaaacaattacggatgaagctataaacaag
caaattcaacgttacagagaacgccttttagaaagccttgtagaaaatgaacattctgta
cataaaaaaggacataaatctgttcatcgtaacaaatccaaaccatccaaaagtgttaag
gagaaaagtggtctgacacctcatcaatcgaaatatcagtcgcgaggtcgtgatatgtca
tcttcccctacacgaaggaattcaagggatcgttcacctccgcgttcattccgtgatcgt
gatcgccctcgccgacgtcatgcttctccttctgggagcctgggtcctggagactggagt
acttataatagcccttctatgcgaatggactcacgaaactccagcgaacgtcggaggaca
tctgcttccgcttgggagcctgactcgacagaagatgaaattaactactcaacacattta
gaagatgtggaagaaggagaagccactgaggatgatgacgcggcggcatttacttcaaat
cagtcccattccattactccgaagaaaaaacatgttccacacaaatcgaatcgcaaacga
caccgttcacgaagtccggacccagtagcagcccataatcgacattcgcatcgttctcgg
actccgtcaccatccagaaaaaaggtacattcgtcagactcagcctccagaagcttaaag
cggaaataa
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