Schistosoma haematobium (urinary blood fluke): MS3_00009136
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Entry
MS3_00009136 CDS
T05004
Name
(RefSeq) hypothetical protein
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00009136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shx03041
]
MS3_00009136
Spliceosome [BR:
shx03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
MS3_00009136
Complex B
MS3_00009136
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
DUF2967
Motif
Other DBs
NCBI-GeneID:
24592308
NCBI-ProteinID:
XP_035587142
UniProt:
A0A922IJB3
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All DBs
Position
5:11108372..11125832
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AA seq
326 aa
AA seq
DB search
MNPIATAAIPIIPPVATPNLLVGLPHMAAPGALPSVTPAVVMPQAVTHMPESIGQPNNTI
YINNLNEKIKRDELKKSLYAVFVQFGQILDIITSRTLKMRGQAFVVFDDINSASTALRAM
QSFPLYEKPMRIHFAKVDSDVIAKRKGTFVQRPKAASRAAAAAAAAAAAEAAASAAAINS
AGPQGGTSARAIRRRQQRAAAAAAAAAASASANNDTIGETNSNGVDQTNSYRPPPPPPTV
NPATIPDQPPNKILFLTNLPDDSDEAMLSMLFGQFTGYREVRMVPGRHDIAFVEFGNEVE
ASAAKLGLQGFNIRPGQAIRITFAKK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgattgcgactgcggctatacctattatcccccctgttgctacgcccaatttg
ctagtcggactgccacatatggcagctcctggagctttgccttccgtaactccagctgtt
gtcatgccccaagctgttacacacatgccagaatcaattggacaaccaaataataccata
tacataaacaatctgaatgaaaagataaaacgcgacgaattaaagaaatccctatacgca
gtttttgttcaatttggtcaaatattggacataattacatcacgaacacttaaaatgcgt
ggtcaagcttttgttgtctttgatgatatcaatagtgcgtccacggcacttcgggcaatg
caaagctttccactgtatgaaaaacccatgcgaatacattttgccaaagttgattcagat
gtcattgctaaacgtaaaggcacatttgtacaacgaccaaaagctgcatcaagagcagca
gctgcggccgctgctgctgctgctgccgaagccgcagcttctgctgctgcaattaattca
gccggtccacaaggaggcactagtgctagagctatccgtagaagacaacaaagagctgca
gcagccgctgctgccgctgcagcttcggcctcagctaacaatgataccatcggtgaaaca
aattctaatggtgtcgatcaaactaatagttatcgtcctcctccaccaccaccgactgtg
aatccagcaactattccagatcaaccacctaataagattttattcttaactaacttaccg
gatgattctgatgaagcaatgttaagtatgctttttggacaattcactggctatcgagaa
gtccgtatggttccaggaagacatgatattgcttttgttgaatttggtaatgaagtagag
gcatcagctgcaaaacttggccttcaaggttttaatattcgacccggtcaagctatacgt
attacttttgcgaagaaataa
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