KEGG   Schistosoma haematobium (urinary blood fluke): MS3_00009151
Entry
MS3_00009151      CDS       T05004                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
shx  Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013  Nucleocytoplasmic transport
shx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MS3_00009151 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    MS3_00009151 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shx03019]
    MS3_00009151 (THOC3)
   03041 Spliceosome [BR:shx03041]
    MS3_00009151 (THOC3)
Messenger RNA biogenesis [BR:shx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     MS3_00009151 (THOC3)
Spliceosome [BR:shx03041]
 Complex C
  Other components
   EJC/TREX
    MS3_00009151 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MS3_00009151 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta EIF3I Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd eIF2A Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_WDR75_1st DSE1_N Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_HPS5 CFAP251_N Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_DCAF12 WD40_RFWD3 PEP5_VPS11_N Beta-prop_SCAP PD40 PSII_BNR Beta-prop_VPS8 DUF7165 Beta-prop_NUP159_NUP214 MIOS_WD40 TRM82_WD
Other DBs
NCBI-GeneID: 75577926
NCBI-ProteinID: XP_051064897
UniProt: A0A922LE65
LinkDB
Position
5:11589446..11598789
AA seq 322 aa
MKSEELIRLKSYFLKNSRVKDFSGYGGKIHTLGWNSNGSRLASGSSDKLVNIYSLESTRL
TKVHSFRGHNESVDQLCWHPSDNDVVATVGADSAIRLWDCRTKKDPITAQCKGENINLAW
SPDARYIAVGSKTDLVSWFDLRAGFKVVQAEQFTSEINEFAWNPSGEAFLLTTGLGSILV
YSGKPGDMKREASIQAHPVNAMCLQFSPTGHQFAVGSADALVSIWDANEFVCLRTLSRLE
WPVRTLGFSYDGKLIAAASEDHFIDIGHVQTGEQVYQVGTHASATFVLAWHPRQYLLSYS
SEAKYERDQGVIRLFGLVNDDL
NT seq 969 nt   +upstreamnt  +downstreamnt
atgaaatcagaagaacttattcgcttgaaaagttactttcttaagaattcccgtgttaag
gatttctctggttatggggggaaaatacatacacttgggtggaatagcaatgggtcgaga
ttagcatctggatcatctgacaagcttgtaaatatatactcactggaatccacaagatta
acaaaagtacatagtttccgaggacataatgaaagcgtagaccaactttgttggcaccca
tcagataatgatgttgttgcaactgtgggtgcagatagtgctattcgtttgtgggactgt
cggaccaaaaaagatccaatcacagcacaatgtaaaggggagaacattaatttggcatgg
tcaccggatgcacgttacatcgctgttggtagcaaaacagatttggtttcatggtttgat
ttgcgtgctggtttcaaagtggtacaggcggaacagttcacttcagaaattaatgaattc
gcctggaaccctagcggggaagcgtttcttttaactactggtcttggaagtatattagtc
tacagtgggaaaccaggtgacatgaaacgtgaagcaagtatccaagctcacccagtcaat
gcaatgtgtcttcaattttcaccaacaggtcatcaatttgctgttggtagtgcagatgct
ctggtgtccatttgggatgcaaatgaatttgtttgcttacgtacattatctcgcttagaa
tggccagtacgcactttgggattctcttatgatggcaagttaattgctgcagctagcgaa
gatcatttcattgatattggccatgtacaaacaggtgaacaagtctatcaagttgggaca
catgcatcggctacatttgtacttgcttggcatcctcgacagtatttgttgagttattca
agtgaagcgaaatacgaacgagatcaaggtgttattcgattatttggtttagtgaatgat
gatttataa

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