Schistosoma haematobium (urinary blood fluke): MS3_00009399
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Entry
MS3_00009399 CDS
T05004
Symbol
COPB2_1
Name
(RefSeq) Coatomer subunit beta', variant 2
KO
K17302
coatomer subunit beta'
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shx04131
]
MS3_00009399 (COPB2_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shx04147
]
MS3_00009399 (COPB2_1)
Membrane trafficking [BR:
shx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
MS3_00009399 (COPB2_1)
Exosome [BR:
shx04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
MS3_00009399 (COPB2_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WD40_RFWD3
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
DUF5739
BUD22
Motif
Other DBs
NCBI-GeneID:
24588549
NCBI-ProteinID:
XP_012792388
UniProt:
A0A094ZE39
LinkDB
All DBs
Position
7:913567..934048
Genome browser
AA seq
1019 aa
AA seq
DB search
MPMKLDIKRKLLSRSDRVKSVDLHSTEPWICAALYNGNVHIWNIEAQQLIKTIEVCTNPV
RAAKFVARKNWIVTGSDDMQLRVFNYNTLERIQQIEAHSDYIRSIAVHPTQPFILTCSDD
MLIRLWDWENNWTCAQVFEGHNHYVMHIAFNPKDNNTFASASLDHTVKVWSLGSGTPNFT
LEGHERGVNCVDYSTSGDKPYLASGSDDRTVKIWDYQTKACVQTLEGHAQNISSVLFHPE
LPIILTGSEDGTVRFWHANTYRLESTLNYGLERVWTMTCQRGKQIVGIGYDEGTVAISLG
RDEPAMSMDASGKLVCARHSELVQANLRSLNFSGDGSEMIQDGERLPVTFKDMGTCEIYP
QIIEHNANGRYVVVYGDGEYIVYTAMALRNKTFGQGLEFVWCQSDAGVYAVRESNAVVKV
YKQMKEVRTFKLDYGAEQIFGGHLLGVRSLTGLTFYDWLTGRIIRRIDNNPKGVYWNESG
QLVALCTNDTFYILRYSADAVPDSNLPTINNNNHEDIDGYEKAFQLVPNGEVNSQVLNGR
WFGDAFIFTTQGNRLCYFVGGEVFTLALLDRPMYLLGYLAKENRLILGDRDLQIVSYTLL
LSVLEYETAVLRGDFTTADAILPNISKDQYTKIAQFLEKQGYRKQAMRVTTDMDHKFELA
LQLGDFELCQQIAMDGDAKTNEAKWKQLAEAACKACKFKYAEEYLSRTDDYASLMLLATS
SGNRKLLEWIGKEAATKGNDNIAFLARFIVTDLEGCLELLTNAKRFPEAAFFSRTYLPSY
MPEIVEQWRNWLDKSNKASAKIANSLANPKDYPNLFPDLEEALSTEKWLKADRKARLNLP
ASAYPTQQLPGDRNLHAEMQNKPIPMEPSSFDDKLPFHANLISTTTINNNNYIPTIEEQQ
QQETISPSVVIAPTTLQSNSNNRNDSGDSELDSVKLIGDEEEDEEEEADEGELDDDVDDD
DDNEEEEEEENNNNDQVDVEAEHVESWYDDDDDDDDSDDNIVDEKRSSEVKTTLSGIGK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgaagcttgatattaaaagaaagcttctatcaagatctgatcgagttaaatcc
gtggatttacattcaacagaaccatggatttgtgctgcactgtataatggaaatgtgcat
atatggaatatcgaggctcagcagttgataaaaactatcgaagtttgtacaaaccctgtt
cgcgctgcgaaatttgttgctcgcaaaaattggatagttacaggctccgatgacatgcag
ttgcgagttttcaattacaatactcttgaaagaattcaacaaatagaagcacattctgat
tatatacgatccattgctgtgcatcctactcaaccatttatccttacatgttcagatgat
atgcttatacgtttatgggactgggaaaataactggacatgcgctcaggtgtttgagggt
cacaatcattatgttatgcatatagcattcaatccaaaggataataacacgtttgctagt
gcttctttggatcatacagtcaaagtgtggagcctaggctcaggtactccaaacttcact
ttagaaggtcatgagagaggagtcaattgtgtagattattccacatccggtgataaacct
tatttggctagtggatcagatgatagaactgtgaaaatatgggattatcaaacaaaagca
tgtgttcaaactctcgaaggtcatgctcaaaatatcagctctgttttattccatcctgaa
ttgccaataattcttaccggatctgaagatggcactgtacgattttggcacgctaacact
tatcgtttagagtcaacattaaattatggcttagaacgtgtctggactatgacgtgtcaa
cgtggtaaacaaatagttggtattggttatgatgaaggtactgttgctatatctttgggt
cgagatgaacctgccatgtctatggatgcatctggaaaattggtttgtgctagacattca
gagctagttcaagctaatttacgatcattgaacttcagtggggatggaagtgaaatgatt
caggatggtgaacgtcttccagttactttcaaagatatgggtacatgtgaaatatatcca
caaattattgaacataacgctaacggacgttatgtggttgtttacggtgatggagagtac
atagtttacactgctatggcattaagaaataaaacatttggtcaaggattagaatttgta
tggtgtcaatccgatgctggagtttatgctgttcgtgagagtaatgctgttgttaaggtt
tacaaacaaatgaaagaggttcgtacatttaaattagattatggtgcggaacaaatattt
ggtggacatttattaggtgtacgttcattaactggtttaacattttatgattggttaact
ggtcgaattattcgacggattgataataatccaaaaggtgtttattggaatgaatctggt
caattagtagcattatgtacaaatgatacattttacatattacgttattcagctgatgct
gtaccagattctaatttgccaacaatcaataataataaccatgaagatatagatggatat
gaaaaagcttttcaacttgtaccgaatggtgaagtcaatagtcaagtacttaatggtcgt
tggtttggtgatgcatttatatttacaacacaagggaatcgtttatgttattttgttggt
ggtgaagtattcacattagctttattggatcgtccaatgtatttattaggttatttagca
aaagaaaatcgtttaattctaggtgatagagatttacagattgttagttatactctatta
ctcagtgtattagaatatgaaacagcggtattacgtggagattttacaactgctgatgct
attctaccaaatatatcaaaagatcaatatacaaaaattgctcaattcttagagaaacaa
ggttatcgaaaacaagctatgcgtgtcactacagatatggatcataaatttgaattagct
ttacaattaggagattttgaattatgccaacaaattgccatggatggtgatgctaaaaca
aatgaagctaaatggaaacaattagctgaagctgcttgtaaggcttgtaaatttaaatat
gctgaagaatatttatcacgtacagacgattatgctagtctaatgctattggcgacaagt
tcaggaaatcgtaaactacttgaatggattggcaaagaagcagctacgaaaggaaatgat
aatattgcttttctagcacgttttattgtcactgatttggaaggttgtcttgaattgtta
acaaatgctaaacgattccctgaagctgcatttttttctcgtacatatttaccaagttat
atgcctgaaatagttgaacaatggcgtaattggttagataaatcaaataaagccagtgca
aaaattgctaattctttagctaatccaaaagattatccaaatttatttccagatcttgag
gaggctttatccacagaaaaatggttaaaagctgatagaaaagcacgtttaaatttaccc
gcttcagcttatccaactcaacagttaccaggtgatcgtaatcttcacgctgaaatgcaa
aataaacctatccccatggaaccatcatcatttgatgataaattaccgtttcatgctaat
ttaatttcaacaactaccataaataataacaattatataccgactattgaagaacaacaa
caacaggaaactatttcaccgtctgttgttatcgctccaacaacactacaatcgaatagt
aacaatcgaaatgattctggagatagtgaattagactcggtcaagttgatcggagatgag
gaagaagacgaagaagaggaagcagatgaaggagagttggacgatgatgttgacgatgac
gacgacaacgaggaggaggaagaggaagagaataacaataatgatcaagtggatgttgaa
gcagaacatgttgaatcttggtacgatgatgatgatgatgatgatgatagtgatgataat
atcgtcgacgagaaacgtagtagtgaagtgaaaaccacattgtctggaatagggaaatag
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integrated database retrieval system
