Schistosoma haematobium (urinary blood fluke): MS3_00009710
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Entry
MS3_00009710 CDS
T05004
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MS3_00009710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shx03009
]
MS3_00009710
Ribosome biogenesis [BR:
shx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MS3_00009710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
WD40
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_RSE1_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
24594902
NCBI-ProteinID:
XP_035588226
UniProt:
A0A6A5DHJ5
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All DBs
Position
7:complement(16216753..16236965)
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AA seq
921 aa
AA seq
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MTSKVSRLSSLVINSDPVYLKSESRIVYSSDKFVVVLDTRTGVSQFLHGHRDSVVWIVPG
IDKPHHVISGGLDGKLIVWDTKTFEKVQILNTRFPIDFCFPTATGYIFSHTCKNKHVVKS
YDRSTGSYVDYVEFPQNAIMAYKDSDFVACIVDSILIVYWINLNVSVRYSVPNNERHSEQ
KNYTCVAAHPNDCIVATGNGLGEIFIWWNLCAQTDDHLNMLNPVSDEWTGNENCAENDTF
DDVKKAIKKHFAEGRLFTYYPVHPSHVKRSLLHWHSVQVTSLCFTSCGTHLLSGGLEGVL
VKWDVTDCFGGPQQRRFLPHFGYPVSSVRSHGGLCEDMISVNLENNSFHIMDGAFTIIYS
KQGFMQLPKHWFPVTLTMPENLMTLQSKLPHRDDELSSTYLLTNGGCGKIQLMNVNDREH
CVQTIDITHQNLVVRSTDSKHPIIHAEVLLMTQLCTEVAFTWFVTYECVKKLADHEQGLP
IDDQSRLTWWQCRESEKENENKDLSSSSVDGIHDFVKFTSVDTYSMSHFGCPAVSMEFVP
SEKNQLYVLLMDYRLMIWNYNIEYTKDPIYSPWIPASCHLLSYCNQNSSILPPGSLIIPF
NVQSNVNQFSTLTSFLVYSGLNLTILNWNQILLESNPKVAASICLRDNLLNLWPDSKKNN
IDKCVIVSYTDNDDDNVTRYLAITVRGHAPRSVSERTSLGALCLLKCTPSSVEMMSVVPD
VLATCLTSHPSKPWLAVGLKDGTVTIYEVQLNSNIKLNIIQSLGNLVSQPLCDRTRKSGV
KNKHKQSNGTMFVSLCFIPLNNDTMIKSINDNHNHVQLIGLMKTLIGRETGRYDLVYYGT
RKQIQKSLMETTGLNIPPKQRSLLQLVDTAAPVKFDNHIRANKRKLNSDIQLENTLKQIS
EYPIYTAPPPDQLLHQLMRKQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacttctaaagttagtagactatcatcgcttgttattaactcggatcctgtatatctg
aaaagcgagagtcgcattgtttactcctctgacaagtttgtcgttgttcttgatacacgc
acaggagtctctcagttcttacacggacatagagactcagtggtttggattgtccctgga
atcgacaaaccccatcatgtgatttctggtggtctagatggaaagctaatcgtttgggat
actaaaacatttgagaaggtccagattttgaataccaggttcccaatagacttctgcttc
cctactgccactggctacatttttagccatacttgcaaaaacaaacatgtcgtgaagtca
tatgaccgctctacaggaagttatgtagactacgtagaattccctcagaatgctattatg
gcgtataaagattctgattttgtagcatgtatagtcgactccatccttatcgtatactgg
attaacttaaatgtctcagtgaggtactcggttcccaataatgaaaggcattcagaacaa
aagaattacacatgcgtcgcagcacatccaaacgactgcatcgttgctacaggaaatggt
cttggtgaaatattcatttggtggaatttatgtgctcaaactgatgatcatttaaacatg
ctaaaccctgtttctgacgagtggactgggaatgaaaattgcgcagaaaatgatactttc
gatgatgtcaaaaaagctatcaaaaaacattttgcagaaggtcgtttattcacttattac
ccagttcatccttctcatgttaaaaggtctttacttcattggcattctgtacaagtgaca
agtctttgctttacgtcatgcggcactcatcttctctctggtggtttggaaggtgtgttg
gtcaaatgggatgtgactgactgttttggaggtccacaacagcgtcgttttctacctcat
tttggctatccagtatcttctgttcgaagtcatggtggtttatgtgaagatatgatatct
gtcaatttggagaataattcatttcatattatggatggagctttcacaataatctactca
aaacaaggttttatgcaattacctaaacactggtttcctgttacattaacgatgcccgaa
aatttaatgactttacaaagtaaacttccacatagagatgatgaattgtcttcgacttat
ctcttgacaaatggtggctgtggtaaaatacaactaatgaatgtaaatgaccgtgaacat
tgtgttcaaacgattgatattactcaccaaaatcttgttgtcagaagtacggattcaaaa
catccaattatacatgctgaagtattactaatgacccagttgtgcactgaagttgcattt
acgtggtttgtgacttatgaatgtgtaaaaaagttagctgatcatgaacaaggattacca
attgatgatcagtcacgtttaacttggtggcagtgccgtgaatcagaaaaagagaatgag
aataaagatctgtcttcatcatcagtcgatggaattcatgattttgttaaattcacttca
gtggatacttattccatgtcacattttggttgtcctgctgttagtatggagtttgttcca
tcagagaaaaatcaattatatgttctgttaatggattatcgactgatgatatggaattat
aatattgaatacacgaaagatcccatatactccccatggattccagcttcatgtcatctt
ttatcgtattgtaatcaaaactcttcgatcctaccacctggctctctaattattcccttc
aatgtacaatctaatgtaaatcagttcagtacattgacaagttttttagtgtattctggt
cttaatctgactattttgaactggaatcaaattttactcgaaagcaatccaaaagttgct
gccagcatttgtctacgagataatctattgaatctgtggccagattcaaagaagaataat
attgataaatgtgttattgtctcttatacggataatgacgatgataatgttacacgttac
ctggctatcacggttcgtggtcatgctcctagatcagtgagtgagcgtacttcacttgga
gctttgtgcctgctaaaatgtacaccttccagtgttgaaatgatgtcagttgttccagat
gtactagcgacgtgtttaacttcacatccgagtaaaccttggttagctgtgggattgaag
gatggaacagttaccatttatgaagttcaattgaattcaaatataaaattgaatatcata
caatcattgggaaatcttgtttctcaaccattatgcgatcgaacacgtaaaagtggagta
aagaataaacataaacaatcaaatggaacaatgtttgtatccctttgttttattccattg
aataatgatacaatgataaaatcaatcaacgataatcataatcatgttcaattgatagga
ttaatgaaaacattaattggaagagagacaggacgatatgatttagtttattatggaaca
cgtaaacaaatacagaaaagcctaatggagactacagggttaaatataccaccgaaacaa
cgaagcttactacaattggttgatacagcagctcctgtgaaattcgacaatcatatacga
gcaaataaacgaaaattaaattctgatattcaattggaaaatactttgaaacaaataagt
gaatatcctatttatacagctccaccacctgatcaactattacaccaacttatgcgaaaa
cagtga
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