Schistosoma haematobium (urinary blood fluke): MS3_00009746
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Entry
MS3_00009746 CDS
T05004
Symbol
VARS1_1
Name
(RefSeq) Valine--tRNA ligase, variant 2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MS3_00009746 (VARS1_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shx01007
]
MS3_00009746 (VARS1_1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shx03016
]
MS3_00009746 (VARS1_1)
Enzymes [BR:
shx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
MS3_00009746 (VARS1_1)
Amino acid related enzymes [BR:
shx01007
]
Aminoacyl-tRNA synthetase
Class I (U)
MS3_00009746 (VARS1_1)
Transfer RNA biogenesis [BR:
shx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
MS3_00009746 (VARS1_1)
Prokaryotic type
MS3_00009746 (VARS1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Jag_N
TUG-UBL1
tRNA-synt_1e
Flu_C_NS2
Motif
Other DBs
NCBI-GeneID:
24593393
NCBI-ProteinID:
XP_051064586
UniProt:
A0A922II45
LinkDB
All DBs
Position
7:complement(18022162..18063499)
Genome browser
AA seq
1292 aa
AA seq
DB search
MDESVLSKCQSKKLAKREKKMAKFEAKQEKLSSDALKNQKSSKKDKLKKEQVVLNAVTDA
SGKKDMTGEMPESYSPKYVEATWYEWWERSGLFKPEFQIESPDKFVMVIPPPNVTGVLHL
GHALTNSIEDAITRWHRMNGKVTLWVPGCDHAGIATQVVVEKKLWREKNLTRHDIGRDEF
VKEVWKWKEEKGDRIYQQLRALGSSCDWSRARFTMDPSMCKAVTEAFIRLYDDGLIYRSL
RLVNWSCTLRSAISDIEVDKQELSGRTLLRVPGYNKPVAFGVIVSFAYPLLPDPSKVGSD
TEIVVATTRLETMLGDTGVAVHPDDDRYRHLIGRLIKHPLIPDRLIPIVGDTFVDPNFGT
GAVKITPAHDYNDWEIGKRHSLPTIVVIGEDGLMTSASGPRFAGLQRFVARDAVRKALDE
LGLYRGEKDNPMVVPICSRSKDIVEPLLKPQWYLRCQDMANAAMKEVSEGRLRIIPSFHI
RTWNNWLKDCHDWCISRQLWWGHRIPAYHVSIRRAGVDNLEVLDPTDHNSWVVGHTIEEA
LQKACDKFHCSPDNLTLNQDNDVLDTWFSSQLFPFSVFGWPEQTPDLKAYYPGSLLETGH
DIIFFWVARMVMIGLKLMGQLPFHTVYLHAMVRDAHGKKMSKSLGNAIDPVDVINGISLE
DLQKQLEQGNLDPNELTRARQAQAKDFPKGIPECGTDALRFALCAYTAQGRNINLDIMRV
QGYRFFCNKLWNAVRYALFHCLHKEFIPPDMSDLNSLFKQFIQHSLLSGTDRWILSRLAY
AVIQCNTGFTEFQFPIATTACYHFWLYELCDVYLEYTKPIIRLKQNNSKLSNMEMERIQL
VCQILYVCFNCGLRLLHPFMPFITEELYQRLLTRNSPNNNNTVNSMDSLCVKSYPKLSDV
NILHDVNGVETDFHLVLNIIHRIRGLISACHIPISLANRQPLNVQLIASETILSTLINGQ
YVTDVIEPLGRCRVIQMVSDRKNVNTSGCVSGTVSASDILWSNEESPVNTVPEDNDDDDA
NNLNGGNLCSDVQSNSVFVNKNPSSIIPATCQIFLHVAGLIDVSLEQKRCQDRLVELKDS
IESLEKKRQHPTYSEKVPMKTQLMDTKKLYELNIELEGLNEVMNNLKDIKQINTNDSSMT
LGEILLDALCNYLNVQENSSIIPSNLFDLEAKIDSILTNELKGGDQLLQYCKIKQWLSWS
IKLLSFNNKIDSKQYSIYREMVENYLTYYKSYYLTGTNYPTIADISVAYTLTQYIDYNEW
INLNNNKQYVVIWFDKLRNYFNQSNKMRSLFK
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgtactttcaaagtgccagtctaagaagctggctaagcgtgaaaagaaa
atggctaaatttgaagccaaacaggaaaaactttcttcagacgccttaaagaatcagaag
tcgtcaaaaaaagacaaattgaagaaagagcaggttgttctgaatgcagtgacagacgca
tctggcaaaaaagatatgactggtgaaatgcccgaatcttactcccccaaatatgttgag
gccacgtggtacgaatggtgggagcgtagtggacttttcaaaccagaatttcagattgaa
agcccagacaaattcgttatggttatacctcccccaaacgtcactggagtcttgcatttg
ggccacgctttgacaaatagtattgaagatgccattacacgatggcacagaatgaatgga
aaagttacactgtgggttcctggatgtgaccacgctggtattgccactcaggtagtggta
gaaaaaaagttgtggagagagaaaaatctcactcgacatgatattggacgtgatgaattt
gtgaaagaagtttggaaatggaaagaagaaaagggtgatcgcatttatcaacaactcaga
gctttgggaagttcttgtgattggtctcgagctagattcactatggatccatccatgtgt
aaagctgttacagaggcttttattcgtttatacgatgatggtttgatttatcgaagcctc
cgattagtcaattggtcttgtactttacgttcagccatatcagatatcgaagtagataaa
caagaactttctggacgtactttacttcgtgttcctggctataataaacctgtagcattc
ggagttatcgtatcgtttgcctaccctcttttgcctgatcctagtaaagttggatcagac
actgaaattgttgtcgcaaccacacgacttgaaacaatgctaggtgatacaggcgttgct
gtacatcctgacgatgatcgttatcgacatttaattggtcgtctaatcaagcatccactt
attccagatagattaattccaatcgttggtgatacatttgttgatccgaactttggaact
ggtgctgtaaaaataacacctgctcatgattataatgattgggaaatcgggaaaaggcat
tcacttccgactatagtagtaattggtgaagatggtttgatgacatctgcttcaggtccc
agatttgcaggacttcaaagattcgttgctcgagatgccgttcggaaagctctcgatgaa
ttaggcttgtatagaggtgaaaaagataatcctatggttgtgccgatatgttctcgaagc
aaagatattgttgaaccattgttgaaaccgcaatggtacctacgttgtcaggatatggct
aatgcggcaatgaaggaggtatctgaaggtcgcttacgtattattcccagtttccatatt
cgtacatggaataattggcttaaagattgtcatgattggtgtatttctcgacaattatgg
tggggacatcgtattcctgcttatcatgtttcgattcgacgtgctggagtagataattta
gaagttttagatcctacagatcataattcatgggtagttggtcatacaattgaagaagca
cttcaaaaagcctgtgataaattccattgttcaccagataacttaactttaaaccaagat
aatgatgtattagatacatggttctcttcacaattatttccattctctgtatttggttgg
cctgaacaaacaccagatttaaaagcttattatcctggaagtttattagaaactgggcat
gatattatatttttctgggttgcacgtatggttatgattggtttgaaattaatgggacaa
ttaccatttcatactgtctatttacatgctatggttcgtgatgctcatggcaaaaaaatg
agtaaatccttgggtaatgcaatcgatccagtagatgtcatcaatggaatatctttagaa
gatttacaaaaacaattagaacaaggtaatcttgatccgaacgaattaacacgtgctcgt
caagctcaagcaaaagattttcctaaaggtattcctgaatgtggaactgacgctctacga
tttgctttatgcgcttatacagctcaaggacgaaatatcaatttggatataatgcgtgta
caaggctatcgatttttctgtaataaactatggaatgctgttcgttatgcgctatttcat
tgtttacataaagaatttattccaccagatatgtctgatttaaatagtctattcaaacaa
ttcatacaacatagtttattatctggtacagatagatggattctatcaagattagcttat
gctgtcattcaatgtaatacaggatttacagaatttcaatttcctatagctactactgct
tgttatcatttttggttatatgaattatgtgatgtttatttggaatataccaaacctatt
attagattaaaacagaataattcaaaattgtctaatatggaaatggaacgtattcaatta
gtttgtcaaatcctttatgtttgtttcaattgtggtctacgtttattacatccatttatg
ccatttattacagaagaattatatcaacgtttattaactagaaatagtcctaataataat
aatactgtaaatagtatggatagtctatgcgtgaaatcctatcctaaactcagtgatgta
aatatattacatgatgtaaatggagttgaaacagattttcatcttgtactgaatattatt
catcgtatacgtggacttatttcagcttgtcatataccaatatcacttgcaaatcgtcaa
cctttaaatgttcaattaattgcatctgaaactatattatctactcttattaatggacaa
tatgtaactgatgtaattgaaccattaggtcgatgtcgtgttatacaaatggtttctgat
cgtaaaaatgttaacacttctggttgtgttagtggaacagtttcagcaagtgatatttta
tggtccaacgaagagtcacctgttaatacagttcccgaagacaatgacgatgatgatgct
aataacttaaatggtggaaatctatgttccgatgttcaatcaaattctgtgtttgttaac
aaaaatccatcatcaataattccagcaacttgtcaaatatttctacatgtcgctggatta
attgatgtatcattagaacagaaacgatgtcaagatcgtttagtggaattgaaagattcc
attgaaagtttagagaaaaaacgtcagcatccaacgtattctgagaaagtaccaatgaaa
actcaattgatggatacgaaaaaattatatgaattaaatatagaattagaaggattaaat
gaagttatgaacaatttaaaagatattaaacaaatcaatacaaatgattcttcaatgaca
cttggtgaaatccttttagatgctttatgtaactatcttaatgtacaagaaaattcatca
ataataccatcgaatctatttgatcttgaagcgaaaattgacagtattctaaccaatgaa
ttaaaaggaggcgatcaactgttacaatattgtaaaattaaacaatggttgtcatggagt
ataaaactattatcattcaataataaaattgattcaaaacaatattcaatttatagagaa
atggttgaaaattatttaacttattataaatcatactatttaactggtacaaattatcca
acaattgctgatatctctgttgcatatacattaacacaatatatagattataatgaatgg
attaatttaaataataataaacaatatgttgttatatggtttgacaaattgagaaattat
ttcaatcaatcaaataaaatgagatcacttttcaaatga
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integrated database retrieval system
