Schistosoma haematobium (urinary blood fluke): MS3_00010191
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Entry
MS3_00010191 CDS
T05004
Symbol
COL4A1_3
Name
(RefSeq) collagen, type IV, alpha
KO
K06237
collagen type IV alpha
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx04382
Cornified envelope formation
shx04512
ECM-receptor interaction
shx04518
Integrin signaling
shx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
MS3_00010191 (COL4A1_3)
04518 Integrin signaling
MS3_00010191 (COL4A1_3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
MS3_00010191 (COL4A1_3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
MS3_00010191 (COL4A1_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shx04147
]
MS3_00010191 (COL4A1_3)
00536 Glycosaminoglycan binding proteins [BR:
shx00536
]
MS3_00010191 (COL4A1_3)
Exosome [BR:
shx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
MS3_00010191 (COL4A1_3)
Glycosaminoglycan binding proteins [BR:
shx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
MS3_00010191 (COL4A1_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
24592777
NCBI-ProteinID:
XP_051074822
UniProt:
A0A922S6L0
LinkDB
All DBs
Position
1:<64772467..>64813234
Genome browser
AA seq
1780 aa
AA seq
DB search
MKPHDNYPFINKYNTYGFILISIFILSNLYVKYTNGAATCIPSPNCTECTCMGIPGPKGD
VGARGHVGRPGPVGQRGLPGPPGLEGERGIPGIPGDPGPKGIMGDKGVLGVPGVDGLKGA
IGIKGPKGFPGEEGCCGAKGPKGLKGAQGSYGFDGLAGERGLKGPKGDKGEPAVVEGIDG
IGEMGPKGEKGELGPKGIRGRDGAKGQPGIAGPKGYQGIKGDHGEPGLKGEKGDTPSPIS
LPYAEPGEKGFKGEKGISYDESALIKGQRIGVKGLKGLPGPRGDPGDEGPPGPRGSPGIN
GVPGTPGPVGDEGAMGKFGKPGAPGIPGPPGRLGQDGLPGPPGPAGFPGPKGDKGYPGTQ
GPKGEKGVKGETTDVDAMPGPDGDIGEPGVKGDRGDPGPYGPRGLPGGRGPRGDPGPKGD
PGPGYAQVIIGEPGRKGEKGLPGLDGKRGKTGRPGIPGMKGEKGFPGREVYGRKGEKGSR
GFPGPIGPPGDRGATGLPGPIGDQGEIGPSIDGPPGPKGVKGQPGLPGIRGREGDPGPVG
EKGDCIVCPDGRPGLQGPKGFRGQPGVPGEPGLDGSPGQKGLPGAQGRDGLVGVPGQKGE
KGERGNDGSRGPKGEPGPVEIVNVTVPEAPRGDVGRPGRAGVVGEQGPKGFPGPKGLPGP
EGPKGDGGLPGLPGFSGTVGKPGRRGEPGRDGIVFDAQKGAPGIPGRDGIKGEKGEKGDR
GMDNIVDQLFEYVKGETGPKGYPGDKGLSGFPGEKGREGEKGIAGIPGKQGKPGFPGLPG
AAGERGDKGLMGPKGPRGIPGPPGEPGRKGIKGLVGPKGLPGTAGDIGERGPSGLPGSSA
IGEKGEEGAPGFPGFPGRKGVPGIKGEKGDRGVDGLPGLDGPKGEMGDRGPKGETGEPGE
VYQGMKGPKGIKGETGLPGVDGPKGDAGEDRFPTIAMKGLPGPPGPRGPEGPKGLPGNTG
LPGKVGPSGPSGAPGSPGEKGDAGQPGTFGPKGLLGEPGDDGVEGPRGETGDEGPRGLPG
SPGPKGLPGLMGPKGLPGEPGGRGVGIKGQKGLPGLKGIKGFPGEPGDDGIPGNKGLPGL
AGVAEKGEKGEKGLKGAQGLPGIKGKPGQMGPLGETGDPGPTGPIGEKGDHGVPGPAGRP
GRNGIVGEPGDLGPRGLPGLPGPLGDKGEKGLRGTTDRLADVGSKGEKGQPGVVGPPGPK
GLQGPKGDQGVQGISGKDGLPGQPGPMGPKGEKGVPGPPGPRGTEGQPGLKGPKGFVGPK
GFPGSVGPPGERGPTGDRGELSRSPVGPKGERGLLGPPGSVGRKGEPGEPGMRGAPGEVG
EPGPDLLGAPGEKGSPGPTGRPGVPGMRGPKGIKGVSPREPGEPGPRGADGPPGIKGERG
PKGFDGSIGRKGLPGLKGEQGTKGFPGQTGRPGEVGEKGDRGPTGLPGDKGSKGIKGEIG
RLGLQGPKGDAAVSVLGLKGEKGIRGDDGFMGPKGLPGIDGVPGAPGPRGEPGDIGEPSA
VGPKGYPGPPGEKGYMGPEGPKGDVGLVGEQGAPGGIGDTRGNTGHLFTVHSQTTRIPSC
PSSTRKLWDGYSFLSMTGSDRAHVNDLASPGSCLQLFNPIPFMFCEKQENCYYAQRNDRS
YWLSTEEEPMMWNPVPANETQRHISRCAVCEAPSKLYAFHSQTLEIPRCPDGWSTLWPGS
SFLMNTGYGAQGGGQQLASPGSCLPQFRSHMFIECTAKGLCGFFEEHKNFWLRVMPSSMD
EHMFGMVMGTVIKVRNSQDSVSKCVVCMRTQPLSTLFYLN
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctcatgataattatccatttataaataagtataatacatatggatttattctc
atatctatttttatattatcaaatctatacgtaaaatatacaaatggagcagcgacgtgc
ataccatcgccgaactgcacagaatgcacttgtatgggaattccggggccaaagggtgat
gttggagctcgtggacatgttggtagaccaggtcctgttggacaacgtggattgcctggt
ccacctggtctagaaggtgaacggggtatacctggtataccaggtgatcctggacccaaa
ggaattatgggtgataaaggtgttttgggtgtaccgggtgttgatggtcttaaaggtgca
attggtattaaaggtccaaaaggtttcccaggtgaagaaggctgttgtggtgctaaaggg
cctaaaggtttgaaaggtgctcagggtagttatggattcgatggacttgctggtgaaaga
ggtttaaaaggtccaaagggtgataaaggggaaccagctgttgttgaaggcatcgatggt
attggagaaatgggacctaaaggtgagaaaggtgaacttggtccaaaaggtattcgtggc
cgagatggagctaaaggacaacctggtatagctggtccaaaaggttatcaaggaataaaa
ggagatcatggtgaaccaggcttaaagggtgaaaaaggggatactccttcaccaatttct
ctaccatatgcagagccgggtgagaaaggattcaaaggtgaaaaagggatatcttatgat
gaatcagctttaatcaaaggacagagaattggggttaagggtttaaaagggcttcctggt
ccacgcggtgatccaggtgatgaaggtcctccaggtccacgaggcagtccaggaataaat
ggcgtgcctggaactccaggtcctgtaggtgatgaaggtgcaatggggaaatttggaaaa
cctggtgcacctggtatacctggaccacctggaagattaggccaagatggcctacctgga
cctcctggaccagctggttttcctggacctaaaggcgacaaaggatatccagggactcag
ggacctaaaggtgaaaagggtgtaaaaggtgaaacaactgatgtggacgcaatgcctgga
ccagatggagatattggtgaaccaggagtaaaaggtgatcgtggtgatccaggcccttat
ggaccaagaggtttacccggtggacgtggaccacgaggagaccctggacctaagggtgat
ccaggtcctggatatgcacaagttattataggtgaaccaggaaggaaaggggaaaagggt
ctcccaggattagatggaaaacgtggaaagacgggacgacctggaattcctggaatgaaa
ggcgaaaaaggtttccctggtcgagaggtatatggaaggaaaggcgaaaagggttcacgt
ggatttccaggacccattggaccacctggtgatcggggagctacaggtctaccaggtcct
attggtgaccaaggggaaataggccctagtattgacggtcctcccgggcctaaaggagtt
aaaggtcaacctggtttaccaggtatacgtggacgtgagggtgatcctggtcctgttgga
gaaaaaggggactgcattgtgtgtccagatggaagacctggtttacaagggccaaaaggt
tttcgaggtcaacctggagtccctggtgaaccaggcttggatggctctccaggacaaaag
ggattacctggagcccagggacgagatggtcttgttggggtgcctggtcaaaagggtgag
aaaggtgaacgtggaaatgatggttcacgtggacccaaaggcgaaccgggtcctgttgaa
atagtaaatgtcactgtaccagaagctccacgtggtgatgttggtcgtcctggtcgtgct
ggagtagtcggtgaacaaggtccgaaaggttttcctggtcctaaaggcttgcctgggcca
gaaggtcctaagggcgatggtggactaccagggttaccaggatttagtggaacagtagga
aagcctggaagacgtggtgaaccaggtcgtgatggaattgtattcgatgcacaaaaagga
gctccgggtattcctggcagagatggcattaagggtgagaaaggagaaaaaggagacaga
ggaatggataatattgttgatcaactattcgagtatgttaaaggtgaaaccggtccaaaa
ggatacccaggggataaaggattatcaggattcccaggagaaaaaggcagagaaggtgag
aaaggaattgctggaatacctggaaaacaggggaaaccaggttttcctggtctaccagga
gctgcaggtgaacggggcgacaaaggtttaatgggtcccaaaggaccgagaggtattcca
ggtccaccaggagaaccaggaagaaagggaataaaaggtctggttgggccaaaaggtctt
cctggaactgctggtgatataggtgaacgaggtccatctggtctacccggttcctcagcg
atcggagaaaaaggtgaggaaggtgcaccaggattccctggttttccaggcagaaaaggg
gttccgggtattaaaggtgaaaaaggagacaggggagttgatggattaccaggattggat
ggtccaaaaggtgaaatgggtgatcgaggacctaagggggaaactggagagccgggtgag
gtctatcaaggaatgaaagggccaaagggtataaaaggtgaaactggtcttcctggtgtc
gatggccctaaaggagatgcaggagaagacagattccctacaattgcaatgaaaggcctt
cctggtccaccaggacctcgtggacctgaagggccgaaaggtttacctggaaacacaggg
ttacctggaaaagttggtcctagtggacctagtggagcacctgggtctcctggtgaaaaa
ggtgatgctggccaacctggaacatttggccccaaggggttgcttggagaacctggagat
gatggtgtagaagggccgaggggtgaaactggtgatgaggggccaagaggtcttcctgga
tcaccaggacctaaaggattacctggtttaatgggtcctaaaggacttccaggagaacca
ggagggagaggagttggaattaaaggacaaaaaggtttaccaggactcaaaggtataaaa
ggtttcccaggtgaaccaggagatgatggaatacctggaaataaaggtcttccaggtcta
gccggagtagccgaaaaaggtgagaaaggtgaaaaaggattaaaaggtgctcaaggacta
ccaggaataaagggtaaaccaggtcaaatgggtccattaggagagaccggtgaccctggt
cctactggccccattggtgaaaaaggcgatcatggagtgcctggtccagctggtcgtcct
ggtcgaaatggcatagtcggtgaacctggcgatttaggaccaagaggactaccagggctg
cctggaccattgggcgataaaggtgaaaagggcttacgtggtacaactgatcgattagca
gatgttgggtcaaaaggtgaaaaaggtcaacctggtgtagtaggtccacctggacctaaa
ggtttacaaggtccaaaaggtgatcagggagttcaggggatatctggcaaagatggacta
cccggtcaaccaggacctatgggtccgaagggagaaaaaggtgtacccggaccaccagga
ccaagaggaactgaggggcaaccaggtttaaaaggtcctaagggatttgtcggccctaaa
ggatttccgggatcagttggtccacccggagaacgtggtccaaccggagaccgaggtgaa
ttgtcaagatccccagtcggaccaaaaggtgaacgtggtttgcttggaccacctgggtcc
gtgggtcgcaaaggtgagcccggggaacccggaatgagaggagctccaggtgaagtgggt
gaacccggtccagatttactcggagcacctggggagaaaggaagtcctgggcctacaggt
agacctggggtccccgggatgagaggacctaaaggaatcaaaggtgtttcacctcgagag
cctggtgaacctggtccaagaggcgctgacggacccccaggtattaaaggagaacgtggc
cctaaagggtttgatggatcaattggtagaaaaggattaccaggtttaaaaggtgaacag
ggtactaaaggattcccaggtcaaacaggtagaccaggtgaagtcggcgagaaaggtgac
agaggacctacaggacttccaggggataaaggcagtaaaggaataaagggtgaaataggc
cgactgggattacaaggtcctaaaggcgatgctgcggtctctgttttgggactaaaaggc
gaaaaagggatacgaggagatgatggctttatgggtcccaaaggtttaccaggaatcgat
ggagttcctggagctcccggcccaagaggtgaacctggggatatcggagaaccatcagca
gtaggtccaaaaggttacccaggtcccccgggtgagaagggctatatgggtccagaagga
ccaaaaggtgatgttggtctagttggagaacaaggagcgccaggaggcattggagacaca
cgtggtaacacaggacacttattcactgttcatagtcagactacacgcatcccgtcatgt
ccatcatcaactcgtaaattatgggatggttattcatttctaagtatgactggatcggat
cgtgctcatgtcaatgatctggctagtcctggttcatgtctacaattatttaatccaata
ccgtttatgttttgcgaaaaacaagaaaattgttattatgctcaacgaaatgatcgaagc
tattggctaagtacagaagaagaaccaatgatgtggaatccagttccagcaaatgaaact
caaagacatataagtcgatgtgcagtttgtgaagctcctagtaaactttatgcttttcat
tcgcaaacattggagattcctagatgtcctgatggttggtccactttatggcctggaagt
agtttccttatgaatactggttatggagcacaaggtggaggacaacaattagcatctcca
ggtagttgtttaccacaatttcgatctcatatgtttattgaatgtactgcaaaaggttta
tgtggattttttgaagaacataaaaatttctggttacgtgttatgcctagttctatggat
gaacatatgtttggtatggtcatgggtactgtcattaaagtacgtaatagtcaagattca
gttagtaaatgtgttgtatgtatgagaacacaaccattgtcaacattattttatttaaat
taa
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