Schistosoma haematobium (urinary blood fluke): MS3_00010410
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Entry
MS3_00010410 CDS
T05004
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MS3_00010410 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shx03036
]
MS3_00010410 (ERCC6)
03400 DNA repair and recombination proteins [BR:
shx03400
]
MS3_00010410 (ERCC6)
Chromosome and associated proteins [BR:
shx03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
MS3_00010410 (ERCC6)
DNA repair and recombination proteins [BR:
shx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
MS3_00010410 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
24596733
NCBI-ProteinID:
XP_035588968
UniProt:
A0A922S348
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All DBs
Position
ZW:complement(48991027..49015576)
Genome browser
AA seq
1426 aa
AA seq
DB search
LGCYTGRHRAKSSDLFYMKEIRSLIMGTLDPYPSSSTSNSKKCMNNPMKFSINKDVIKKA
ENQDVNSIQRIVAYDHLEFETSVIEQAKNTFKRNNSLQISVTRERLSTLDDDIMSSQHEL
KKMELSLDTLLSQVSTEVSNSSLENRKIRSLELEIETKMKLIDTLISRKSALLNKLSSLE
KANFISDDNVSKPDEDLLSVNIVKPLSTDDFNSPIKHLSTKLYKVKRCENNAVELKKLSK
SKHNDDADINAFQERLRRQRRTELLEEQLAREHEVPSSNPSDEKLDGGFCVPGSIWCRLF
DYQQKGVKWLWDLHQKGYGGIIGDEMGLGKTIQIIALLAGLHYSNIEDRSYRLYLSTRNL
TSECQQEFLGLGPTLIVCPATVLNQWMSELHSWWPPIRVAILHSTGSGYGKPNKLIQMIT
NNPGSVLLTTYSTLVTYRDMLTSRNWSYVILDEGHKIKNPEAEATLAVKHFSTPHRLILS
GSPIQNNLRELWSLFDFVCPGRLGPLPEFMQQFSIPITQGGYATASPLQVETAYQCACTL
RDLLKPYLIRRLKADVQIQLPAKSEQVLFCRLTDYQRKLYREYLESQVCQDLLNGKGNIF
PSLILLRNLCNHPDLATGGPRDSCFLNEEFESDKQGIENVCLSYSWSRFGCPRRSSKMLV
VASLLKNWYDQGHKVLLFSQSRRMLTLLERLVQLMKFSYLRMDGTTPVSQRHELIRRFNY
RSTSDSEKIDRTTDQLDIFLFLLTTRVGGLGVNLTSANRVLIYDPDWNPTTDLQARERAW
RIGQSRDVVIYRLLTSGTIEEKIYHRQIFKQFLTNRILKNPRQQRFFKTNDLQELLTFED
ESDIQIPETALYLKSEGMGHTLTNSLTENRFDILAKKLKDNPLQSKSSRVNTEISSGSDV
DDDEKEEDEDEKESKVSVDDNFINTLLYPDAKNKRTEQLRQLAKEISRRIAEECSNKDNS
VQSVTKQSKEMTSNKYSLNRKRKSDNKGTRVDGKRIKLVAKQCRYDVGEGMDISLSGNQL
AEPTKATSSNSEDDNFIQNVLASSCFSSNYLSSNKQDYSTVSSFKEKRSMIDQDTRDEAS
RVAKEALKNIQKFHQSNEMKCKESFRKNKDDVEKAKNGKSSKIKCTDHQDFHSLSSHKSL
KFTQKMSASSSPIFRQITQIVHHDKLLDEMTNPNHIDSSFDQLAVNRLANKAIITLEEEV
KRWQQSNIRSFSQTTEITQRRLVFYPFGQAKNRFLWNRNESTNCGYIQLLQASSDFECST
KKAYNENSANLHVRFSSELLLSLIRSRKIIRHNHLHSSSSTESVDSVLNHSMQRLCAELI
RTLGSSNTVTSEYLAIHFKSILNENNGCTTVNIRNNATVVNRSITSRHFRSLLKQLAIRH
RSKCDQSQLDLPSRGRLDDVWTLRDKFQSIASYLLVNLAVAERLDQ
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
ttgggttgttacacggggaggcatagggctaagtcgtcagatctattttatatgaaagaa
atcagatccttgataatgggtactttagatccgtaccccagctcatcaactagtaactca
aaaaagtgtatgaataatcctatgaaattctcaattaataaggatgtaataaaaaaagct
gaaaatcaagatgtgaattcaattcaacgtatcgtcgcatatgatcacttagaatttgaa
acaagtgttattgagcaagctaaaaatactttcaagagaaataacagtcttcagatcagt
gtgacaagggaaagactttctactctagacgatgatataatgtcttctcaacatgaactg
aaaaaaatggaactatcacttgatacactgctcagtcaggtgtctactgaagtgtctaat
agcagtttggaaaataggaaaatacgttctttagagttggagatagaaacaaagatgaag
cttattgacactttaatatctagaaaatccgctctgttgaataaactgtcttctttagag
aaggccaactttatttcagatgacaacgtttcaaaaccagatgaagatttgctaagtgtg
aatattgtgaaaccactgtccacagatgactttaattctcctataaaacacctcagtaca
aagttatataaagtaaaacgttgtgaaaacaatgctgtggaactgaaaaagctgtctaaa
tctaagcataatgatgatgctgatataaatgcgtttcaggaacgattgagacgtcaaaga
cgtactgaattattagaggagcaattagctagagaacatgaggtaccttctagtaatcct
tctgatgaaaaactagatggtggattttgtgtcccgggttctatttggtgtcgattattt
gattatcaacaaaaaggtgtcaaatggttatgggatcttcatcaaaaaggatatggtggt
attattggagatgagatgggtttgggaaaaaccatacagattattgccttactagctgga
ttgcattattcgaacatagaagatagatcatatcgtttatatctatctactcgtaatcta
acttcggaatgtcagcaagaatttttaggattaggtccgaccttaattgtttgtccagct
acagtattaaaccagtggatgtcagaactccattcatggtggcctccgattcgtgtggcc
atattgcattcgactggatccggctatggaaagccaaataaacttatacaaatgataact
aataatccaggaagtgttcttctaaccacgtattcaactctagtgacttatcgtgatatg
ctaacatctcgaaattggtcgtatgttatactggatgaagggcataaaataaaaaatcca
gaagctgaggctacattagctgttaaacatttttccactcctcatcgtttgattctctct
ggtagtccaattcaaaataatctacgtgaattatggtcactttttgattttgtgtgtcct
ggacgattaggacctttgccagaatttatgcaacaattttctataccaattactcaggga
ggttatgctaccgcttcaccacttcaggttgaaacagcttatcaatgtgcatgtacttta
cgagatcttttaaaaccctatctcattcgaagacttaaagctgatgtacaaattcaactg
ccagctaaatcagaacaagttttgttttgccgactaactgattatcagcgaaaactctat
cgagaatacttagagtctcaagtatgtcaagatttactaaatggaaaaggcaatattttt
ccttctttaatattattaagaaatttatgcaatcatccagatttagctacaggtggtcca
agagatagttgttttctaaatgaagagtttgagtctgataaacaaggtattgaaaatgta
tgcttatcttattcatggtcaagatttggttgcccacgtagatctagtaaaatgttagtt
gttgcttcacttcttaaaaactggtatgatcaaggacataaagttctactgttttcacaa
agtcgtcgtatgcttacattacttgaacgtttagtacagttgatgaagttttcttatctt
agaatggatggaacaactcctgttagccaacgtcatgaacttattcgacgtttcaattat
cgttcaacatcggatagtgagaaaatagataggacaacagatcagttagacatatttcta
tttttattaactacacgtgttggcggtttaggtgtaaatttaacttcagctaatcgagta
cttatctatgacccagattggaatcctactactgatctacaagctcgtgaaagagcatgg
cgtatcggacaatcaagagatgttgttatttatcgtttattgacaagcggtactattgaa
gaaaaaatatatcatagacaaatattcaaacaatttcttactaatcgaattctaaaaaat
ccacgtcagcagcgattttttaaaacaaacgaccttcaagaattattaacttttgaagat
gaatcagatatacaaatcccagaaacagctttgtacttgaaatcggaaggtatgggtcat
acactgactaattcattaaccgagaatcgatttgatatacttgctaaaaaactgaaagat
aatccattgcaaagcaaatcatcacgcgtgaatacagagattagtagtggtagtgatgtt
gatgatgatgagaaggaagaggatgaagatgaaaaagaatcaaaggtttctgtggatgac
aattttataaacactttgttatatcctgatgcaaaaaataagcgtacagaacaacttcgt
caacttgctaaagaaataagccgtcgtatagcggaggaatgttcaaacaaagataattca
gttcaatcggttactaagcagtctaaagaaatgacttcaaacaaatatagtttaaatcgc
aaacgtaaatctgataacaaagggacacgggtggatggaaaacgaatcaagctagtagca
aaacagtgcaggtatgatgttggtgaaggcatggatatctctttatctggaaatcaactt
gctgaaccaaccaaagcgacaagcagtaattctgaagatgataactttattcaaaatgtc
ttagccagttcttgtttcagtagcaattacttatccagtaataagcaagactactctacg
gtttcttcctttaaggagaagcgatcaatgatagatcaagatacgcgtgatgaagcaagt
cgagttgcaaaagaagctctaaagaatattcagaaatttcaccaatccaatgaaatgaaa
tgtaaagagtcatttcgaaaaaataaagatgatgtcgaaaaggcaaaaaatggaaaatct
tcgaaaattaaatgtacagatcatcaagatttccattcactttcttcccataaatcatta
aaattcacacaaaaaatgtccgcaagcagttcaccgatatttcgtcaaataactcaaata
gtacatcatgataaattattggatgaaatgactaatccaaatcacattgattcttcattt
gaccaattggccgtgaatcgattagcgaataaagctattattactttagaagaagaagtc
aagcgttggcagcaaagtaatatcagatctttttctcaaactacagaaataactcaacgt
agattagtattttatccttttggtcaagctaaaaatcgtttcctttggaatcgaaatgaa
tcaactaattgtggttatattcaacttttacaagcatcaagtgattttgaatgttcaact
aaaaaagcttataatgaaaattcagctaatttacatgttagatttagttcagagttactt
ttaagtcttatacgttcgcgtaaaatcattcgtcataatcatttacacagttcatctagt
accgaatcagttgattctgtgttaaatcattcaatgcagcgtctttgtgctgaacttatt
cgaacacttggcagttcgaatactgttacaagtgaatatttagcaatacattttaaatct
attctgaatgagaacaatggttgtactacagtaaatattcgaaataacgctactgttgta
aatagaagtattacatcccgacattttcgctctttgcttaaacaacttgcaataagacat
cggtcaaaatgtgatcaatctcaactggatttaccttcacgtggtcgcttggatgatgta
tggactttgcgtgataaatttcagtctattgctagttatctcttagtaaacttggcagtg
gcagaaaggttggatcaatga
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