Schistosoma haematobium (urinary blood fluke): MS3_00010643
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Entry
MS3_00010643 CDS
T05004
Symbol
RBM8A_1
Name
(RefSeq) RNA-binding protein 8A, variant 2
KO
K12876
RNA-binding protein 8A
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013
Nucleocytoplasmic transport
shx03015
mRNA surveillance pathway
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00010643 (RBM8A_1)
09122 Translation
03013 Nucleocytoplasmic transport
MS3_00010643 (RBM8A_1)
03015 mRNA surveillance pathway
MS3_00010643 (RBM8A_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00010643 (RBM8A_1)
03041 Spliceosome [BR:
shx03041
]
MS3_00010643 (RBM8A_1)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MS3_00010643 (RBM8A_1)
Spliceosome [BR:
shx03041
]
Complex C
Other components
EJC/TREX
MS3_00010643 (RBM8A_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
75578202
NCBI-ProteinID:
XP_051069660
UniProt:
A0A922S0D3
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All DBs
Position
3:complement(33220325..33224143)
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AA seq
143 aa
AA seq
DB search
MLLSPVDSVGTTKEGYESLVVDDGSSKSGPQRSVEGWILFVRNVQEEATEEDIRDKFCEY
GDIKNIHLNLDRRTGYLKGYALVEYENFKEAFTAMEHLNGSELNGQRIHVDWAFTKGPNP
VKMSTKHRTRERSRSRSVDRARR
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcttctaagccctgtagactcagtcggaacgacaaaagaagggtatgaatctctagta
gtggatgacggatcgtcaaaatcaggacctcaaagatccgtagaaggttggatattgttt
gtaaggaatgtacaggaagaagctacagaagaagatattcgagataaattctgtgaatat
ggcgatataaaaaatatacaccttaaccttgaccggcgaactggttatttaaaaggatat
gcattagtagaatatgaaaatttcaaggaagcttttactgctatggaacatctaaatggt
tctgagctaaatggtcaaagaattcatgtggattgggcgtttacgaaaggtccaaatcca
gtcaaaatgtcaaccaaacacagaacacgtgaacgtagtcgaagtcgatcagttgaccgt
gctcggcgataa
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