Schistosoma haematobium (urinary blood fluke): MS3_00011034
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Entry
MS3_00011034 CDS
T05004
Symbol
ALYREF2
Name
(RefSeq) Aly/REF export factor 2
KO
K12881
THO complex subunit 4
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013
Nucleocytoplasmic transport
shx03015
mRNA surveillance pathway
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00011034 (ALYREF2)
09122 Translation
03013 Nucleocytoplasmic transport
MS3_00011034 (ALYREF2)
03015 mRNA surveillance pathway
MS3_00011034 (ALYREF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00011034 (ALYREF2)
03041 Spliceosome [BR:
shx03041
]
MS3_00011034 (ALYREF2)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MS3_00011034 (ALYREF2)
TREX complex
MS3_00011034 (ALYREF2)
Spliceosome [BR:
shx03041
]
Complex C
Other components
EJC/TREX
MS3_00011034 (ALYREF2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MS3_00011034 (ALYREF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
CBP_BcsR
Motif
Other DBs
NCBI-GeneID:
24591733
NCBI-ProteinID:
XP_035589129
UniProt:
A0A922IKZ2
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All DBs
Position
6:complement(8711709..8716109)
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AA seq
244 aa
AA seq
DB search
MSCRWSLSPLNCCKSHPVWRDCAKSRGSNLIMDQSLDDIIQQKRIRVTRGKGRGRGRGGE
SLRGVRRGGIARRNTNGMSRALPDKWQHDMFQDGRSPKGSGNTVGNAARLHISNLDFGVN
NDDINELFREFGAIRKATVHYDRSGRSLGTAEVVFVNPLSATKAKNHYNGVPLDGRPMVI
QLVGAAVETTVTSRPRVTRPRGSPIRRGFGRGRGRARGRGRIQKPTVTKEELDAQLAAYN
AQRA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgtcgttggagcctcagtccactgaattgctgtaaatcacatccggtgtggcgg
gactgtgcgaaatcgcgaggttcaaacttgataatggaccagagtctcgatgatattatc
caacagaagcgcatcagagtaactagaggtaaaggtcgtggacgcggtcgcggtggtgaa
tctttgcgaggtgtccgtcgtggtggaatcgcgcggcgaaacacaaatggaatgtcacga
gccttacctgacaagtggcagcacgatatgttccaagatggtcgtagccccaaaggatct
ggtaatacagttggaaatgcagcgaggcttcacatttcaaacttggactttggtgttaac
aatgatgatataaatgaactttttcgtgagtttggtgcaattcgaaaggctactgttcat
tatgatagaagtggtcgttctcttggcaccgcagaagtcgttttcgtgaacccactaagt
gcaacaaaagccaaaaatcactacaatggtgtaccgcttgatgggcgcccaatggtcatt
cagttggtcggtgcagctgtcgaaactactgtaacatcacgtccccgcgttactcgccct
cgtggttcaccgattcgtcggggtttcggacgtggtcggggtcgtgcacgtggtcgcgga
agaattcagaaacctacagttactaaggaagaattagacgcacagttggctgcttataat
gctcagcgtgcttga
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integrated database retrieval system
