| Entry |
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| Symbol |
SDN5_1
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| Name |
(RefSeq) Small RNA degrading nuclease 5, variant 2
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| KO |
| K14570 | RNA exonuclease [EC:3.1.-.-] |
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| Organism |
shx Schistosoma haematobium (urinary blood fluke)
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| Pathway |
| shx03008 | Ribosome biogenesis in eukaryotes |
|
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| Brite |
KEGG Orthology (KO) [BR:shx00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MS3_00011128 (SDN5_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:shx03009]
MS3_00011128 (SDN5_1)
Ribosome biogenesis [BR:shx03009]
Eukaryotic type
Pre-60S particles
RNases
MS3_00011128 (SDN5_1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:complement(10969124..10988037)
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| AA seq |
691 aa
MDFRESNKIKKENKKKPILVIKDRKTALSALDIQKLLGLTIFPQHFVKWPDWCSVTKPSF
IKNIVLPLKVLNPEAYKYTWDREISTVSRSFLTTHAAAMADLNKSILTPVPRRTWIDDEK
TIDKMRIIKSVHEITKEQLPSQTTNSTSTTTTTTNEPVEKRTLKRKADKLFPLPIPGTPD
AFDRTLLILNVEQMKKENVPLPNEFLIDQRKYFKNRSDFVPSKPVYLPVSANSPMYAVDC
EMVLTSVGSELARVTMVDEKATVMFDRLVKPPNPVKDYLTKFSGITREMLALIDTTLADI
QRELAETLPGDAILVGHSIGNDLEAMKVFHPYLIDTSVIYNLKGNRAAKTRLRFLSEHFL
GRMIQTGKGGHSSAEDAIATMDLVRLKLSQDIGFGDVTTSWRFPEDYQSPIETKSARFTA
LTSNKQNSNISGCLQQYDNTTNDNNLPFISSTCNDLLTESQYFETHPVFQDHLLKLCSFY
KSLGKPIHLFNRLLHDSGITYAYWPIYQGENDKEQQQQQREEQEREKESVQHITTDSKHS
EIFIPINFNSTDHQTTTTDNVNTTITTATTTTNSDEPTTTLTVVNKISKKLSNYIVGLCN
SHRLVMIQANCSPEWDKEKCYHKVCKFCTKLYSNLAENSLIGVICTGSEFQKPLSKKRTH
ANILKSALGNFYITLNSNVVVQTTTVDNDSK |
|---|
| NT seq |
2076 nt +upstreamnt +downstreamnt
atggattttcgcgagtcgaacaaaatcaagaaagaaaataaaaagaagcccatacttgta
attaaagatcgaaaaactgctctgtcggctttggatattcaaaagttgttaggcttgacg
attttcccccaacatttcgttaaatggcctgattggtgttcagtcaccaagccctcgttc
atcaagaatattgttctgccactgaaagtattaaatccagaagcttataagtatacatgg
gacagagaaatttctactgtctccagaagtttcctcacaactcacgcagcagctatggcg
gatttaaataagtcaatactaactcctgttccccgccgcacgtggatagatgatgaaaaa
actattgataaaatgcgtataatcaaatcagttcacgaaataactaaagaacagttacct
tcacagactactaattctacttctactactacgacaactactaatgaaccagtagaaaaa
cgcactcttaaaagaaaagctgataaactttttccattacctataccaggtacaccagat
gcatttgatagaactttactgattttaaatgttgagcaaatgaaaaaagaaaacgttcca
ttacctaatgaattcttaatcgaccaacgtaaatacttcaaaaaccgttcagattttgta
ccaagtaaacctgtataccttcctgtatcagccaacagcccaatgtatgcagtagactgc
gaaatggtacttacatccgtaggaagtgagttggctcgagtgactatggttgatgagaag
gcaacagttatgttcgatcgtttagtgaaaccgccaaatcctgttaaagactatttaact
aaattcagtggaattactagagagatgcttgcattaatagacactacactggcagatata
cagcgcgaattagctgaaacgttaccaggagatgctatcttagttggtcattcgattgga
aatgatttagaagccatgaaggtttttcatccgtatttaattgatacaagtgtcatctat
aatctgaaaggcaatagagcggctaaaacacgtcttcgatttctatcagaacattttctt
ggacgtatgattcaaactggtaaaggaggtcattcttccgctgaagatgccattgctaca
atggatctggtgcgattaaaattaagccaagatattggctttggtgatgtgactacatct
tggcgtttcccagaagattaccaatcaccaatagaaaccaagtctgctagatttactgca
ttaacaagtaataaacaaaactcaaacatctctggttgtttacagcaatacgacaatact
actaacgacaataaccttccatttatttcatcaacatgtaatgatttattaacagaaagt
caatattttgaaactcatccagtttttcaagatcatctattaaaattatgttcattttat
aaatctttgggtaaaccaattcacttgtttaatcgtttactacatgattccggtataact
tatgcttattggccaatttatcaaggagaaaatgacaaagaacaacaacaacaacaaaga
gaagaacaagagagagaaaaggaatcagttcagcatattactactgattcaaaacatagc
gaaattttcatacctataaattttaattcaactgatcatcaaacgaccactactgataat
gtaaatacaacaataacaactgctactactactaccaacagtgatgaacctacaacaaca
ttgacagtagtcaataagatttcgaaaaaattatcaaattacatcgttggtttgtgtaat
tcacatagattggtaatgatacaggcgaattgttcgcctgaatgggataaagaaaaatgc
taccataaagtgtgtaaattctgtacaaaattatattcaaatttagcagaaaatagttta
atcggtgttatttgtacaggttccgaatttcaaaagccattatctaaaaaacgtacacat
gcaaacattttaaaatcagctttaggcaatttttatataacactcaattcaaatgttgtt
gttcaaactacaactgttgataatgattccaaatga |
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