Schistosoma haematobium (urinary blood fluke): MS3_00020002
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Entry
MS3_00020002 CDS
T05004
Symbol
THOC1_1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013
Nucleocytoplasmic transport
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00020002 (THOC1_1)
09122 Translation
03013 Nucleocytoplasmic transport
MS3_00020002 (THOC1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00020002 (THOC1_1)
03041 Spliceosome [BR:
shx03041
]
MS3_00020002 (THOC1_1)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
MS3_00020002 (THOC1_1)
Spliceosome [BR:
shx03041
]
Complex C
Other components
EJC/TREX
MS3_00020002 (THOC1_1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MS3_00020002 (THOC1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
DUF4800
Motif
Other DBs
NCBI-GeneID:
24592378
NCBI-ProteinID:
XP_051069247
UniProt:
A0A922RZP6
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Position
3:complement(22150187..22163212)
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AA seq
560 aa
AA seq
DB search
MLCLLASDSMDDVKTLLKMGVAAALANLCSAPTPFLLFADVFNTKPISLCEEMFGFMEET
IITLKDVPLFASGRNTLLRMCNDLLRRLSKSQNTVFCGQIQLFLTRLFPLDEKSGLNFMS
NFNSEKDVLYNKNPDPSAFKHQVSHDHTSDDLEEGEMTDSSTPLEVDAGLYVKFWSLQEF
FKSPALCYEKAKWMRFTSSTDTVLDVFSSIKLMAIEEGDICSQSSSGTFSKYLTSEKLLD
LQLMDPSFRRYILVQLLILFQYLTTTVKFKTIDQVLSEDQCAWVNQRHEVVLRLLSSNSP
NSSSGGTFVSTVERILERESYWNRWKNDGCPSFVRNPEKSRLSVRKRHINPLVTRTGQKV
YRFGNRELDKLWNVCPDNLAACRDKRRVFNPDLHSYFQDAIMEMDPAEKVEEEYKSINKD
EWSWRALRFLSRKCPHFYINWNPPGRPVKDYLSVILTEKIQSEEDKKGPTINVSDYDNRR
GSDGSTGDSIPNKQPKLEESVDSAILDSTVKSSSLSRTRSVPNTKQLQEHTLTKGQTNAK
SYGSPMRTRYRDTLTANITR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtctacttgcctcagactccatggacgatgtgaaaacacttctaaaaatgggt
gttgcggcggccttagcgaatttgtgttctgcgccgactccatttttgttattcgcggat
gtttttaacaccaaaccaatatcgctttgtgaagaaatgtttggatttatggaggaaaca
atcatcactttgaaggatgtacccttatttgcttcaggaagaaatacattgttaagaatg
tgtaatgacctacttagacgcctgtcaaagtcacagaatactgttttttgtggccaaatt
caactcttcttaacgcgtttatttccattagatgaaaagtctggactaaattttatgagc
aactttaactcagaaaaagatgtgctgtacaacaaaaatcccgacccaagtgctttcaag
catcaggtttctcacgatcatacatctgatgatttggaagagggggaaatgactgattca
tctactcccttagaagtggatgccggtctttatgtcaaattttggtctcttcaggagttc
tttaagtctccggctttgtgttacgagaaagctaagtggatgcgtttcacaagtagcaca
gacacagtgttagatgtgttttcgagtattaaactaatggcaatagaagaaggcgatatt
tgctctcagagtagcagcggaacgttttccaagtaccttacaagcgagaaactgctggat
ttgcaacttatggatcctagtttccggcggtatatacttgttcagctactaatcctgttt
caatatttaacaactacagttaaatttaaaacaattgaccaagtacttagtgaggatcag
tgcgcttgggttaatcaaagacatgaagtagtgttacgactgttatcctctaatagtcca
aacagttcttcgggtggtacgtttgtttctacagtagaacgcattctggaacgtgaaagt
tattggaatagatggaagaacgatggatgcccttcattcgtacgaaatcctgaaaaatct
aggttatctgttaggaaaaggcatataaaccctttagttactcgtactggtcagaaagtt
tatcgttttgggaatcgagagctagataaattatggaatgtatgtccggataatttagct
gcttgtcgggacaaacggcgagttttcaatccggatcttcattcctattttcaagatgct
atcatggaaatggaccctgcggaaaaagtcgaagaggaatacaaatcgattaataaagat
gaatggagctggcgcgctcttcgttttctttcaagaaagtgtccacatttttacatcaac
tggaacccacctggacgacctgtaaaggactatttatcagttattctcactgagaaaatt
caatctgaggaggataaaaagggtcccactattaatgtttctgattatgacaatcgtcgt
ggctctgatggcagtactggcgactccatacccaataaacaacctaaactggaagaatca
gttgattcagcaatactagattctactgtaaagtcttccagcttgtcacgcacccgatca
gttccgaataccaagcagttacaggaacataccttaactaaaggtcaaacaaatgccaag
tcatatggtagcccaatgagaactcggtaccgtgatacattaacagcaaatattactcgc
taa
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