Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_1911
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Entry
SHJG_1911 CDS
T02063
Name
(GenBank) decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00300
Lysine biosynthesis
shy00470
D-Amino acid metabolism
shy01100
Metabolic pathways
shy01110
Biosynthesis of secondary metabolites
shy01120
Microbial metabolism in diverse environments
shy01230
Biosynthesis of amino acids
Module
shy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHJG_1911
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHJG_1911
Enzymes [BR:
shy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SHJG_1911
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AEY87186
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Position
complement(2336937..2338175)
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AA seq
412 aa
AA seq
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MTGPTELAERFGTPSYVYDLDRVAAARDDLFAALPDEVELFYAAKANPHPEVLRELRCGG
ARGCRAEISSVGELDAALRAGFPGDRILYTGPGKTTGELTEALTRGVRLFSTESYGDLCR
VGETALGLGLTADCLIRVNNATGAAATSIRMTGVPSQFGFDSETLPGLAAALRDVPGTSI
AGLHFFPLSNAKDEASLVAEFRHTVATAAALQDALGVTFRFLDIGGGFAAPYAVQGERPV
YGGLRDALAETLDEHFPGWRDGAPRIACESGRYLVADSGTLLTSVVNVKDSRDTRYLVLD
AGINTFGGMSGLGRILPVSVEPHESVGADGTPASLAGPLCTPGDLLGRNVPLPELVPGDL
LTVPNAGAYGPTASLLMFLGRPAPAEIVVRGDTLVSVSRIRHTRTYDHGQAL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggccccaccgagctggccgaacgcttcggcaccccgtcctacgtgtacgacctg
gaccgggtggcggcggcccgcgacgacctgttcgccgcgctgcccgacgaggtcgagttg
ttctacgccgccaaggccaacccgcaccccgaagtgctgcgcgaactgcgctgcggcggc
gcccgcggctgccgcgccgagatcagctccgtcggcgaactcgacgccgccctgcgggcc
ggcttccccggcgaccgcatcctctacaccggccccggcaagaccaccggggaactgacc
gaggcgctgacgcgcggcgtccgcctgttctccaccgagtcctacggcgacctctgccgc
gtcggcgagacagcgctcgggctcggcctcaccgccgactgcctgatccgggtcaacaac
gccaccggcgccgccgccaccagcatccgcatgaccggcgtgccctcgcagttcggcttc
gacagcgagaccctgcccggcctcgccgccgcactgcgcgacgtccccggcaccagcatc
gccggactccacttcttcccgctgagcaacgccaaggacgaggccagcctcgtcgccgag
ttccgccacaccgtcgccaccgccgccgccctccaggacgccctcggcgtcaccttccgc
ttcctcgacatcggcggcgggttcgccgcgccctacgccgtgcagggcgagcggcccgtc
tacggcgggctccgcgacgccctcgccgagaccctggacgagcacttccccggctggcgg
gacggcgccccgcggatcgcctgcgagtcgggccgctacctggtcgccgacagcggcacc
ctgctcacctccgtcgtcaacgtcaaggacagccgcgacacccgctacctcgtcctcgac
gccggcatcaacaccttcggcggcatgtccggactcggccgcatcctgcccgtgtccgtc
gagccgcacgagtccgtcggcgcggacggcacccccgcgagcctcgccgggccgctgtgc
accccgggcgacctgctcggccggaacgtcccgctgcccgagctcgtaccgggcgacctg
ctcaccgtgcccaacgccggcgcctacggacccacggccagcctgctgatgttcctcggc
cggcccgcccccgccgagatcgtcgtccgcggcgacaccctcgtctccgtctcccgcatc
cggcacacccgcacctacgaccacggacaggccctgtga
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