Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_2023
Help
Entry
SHJG_2023 CDS
T02063
Name
(GenBank) selenocysteine synthase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00450
Selenocompound metabolism
shy00970
Aminoacyl-tRNA biosynthesis
shy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SHJG_2023
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHJG_2023
Enzymes [BR:
shy01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
SHJG_2023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
AEY87298
LinkDB
All DBs
Position
complement(2482065..2483468)
Genome browser
AA seq
467 aa
AA seq
DB search
MEQRPVRGRAAEDGTLGAPVTTDPPRQRDAADDARRRIPRTDALLRDPRLAEAVERLGAH
RVKAAVRQAQERARAGGIPPEHVARTALDLLPAAASGLRPVLNATGVLLHTNLGRAPLSA
AARRAVQEAAGPTDVELDLATGVRARRGRSALAALRAGVPAAGAAHVVNNGAAALALAAT
ALAAGKEIVVSRGEMVEIGDGFRLPDLLVSTGARLREVGTTNRTAPADYAAVVGPDTGFV
LKVHPSNFRITGFTRSADVADLTGLGVPVVVDIGSGLLAPHPALPEEPDADTQLRAGAAL
VTASGDKLLGGPQCGLLLGREDLVRTLARHPLARALRVDKLTLAALEATLTGPPTPTALA
LAADPARLRARAGRLAAGLAADGIDVLAVESAATVGGGGAPGVTLPSAALSLPEPYAAAL
RTGRIPVVGRLETGRCLLDLRAVPPEDDDRLAEAVRSARPVAEGRGK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcggccggtacgaggaagggcagccgaggacggcacgctcggcgcgcccgtg
accacggacccgccccggcagcgggacgcggccgacgacgcgcgccgccgcatcccgcgc
accgacgccctcctgcgcgacccccggctcgccgaggcggtcgaacggctcggcgcgcac
cgggtgaaggccgccgtacggcaggcgcaggagcgggcccgcgcgggcggcatcccgccg
gaacacgtcgcgcggaccgccctggacctgctgcccgccgccgcgagcggcctgcgcccg
gtgctcaacgccaccggggtgctgctgcacaccaacctcggccgggccccgctgtccgcc
gccgcccggcgggccgtccaggaggcggcgggtcccacggacgtcgaactcgacctggcg
accggcgtccgggcccgcagaggacgctccgcgctcgccgcactgcgcgccggggtgccg
gctgccggcgccgcgcacgtcgtcaacaacggcgccgccgcgctcgccctcgccgccacc
gccctcgcggccggcaaggagatcgtcgtcagccgcggggagatggtggagatcggcgac
ggcttccgcctgcccgacctgctcgtctcgaccggcgcacggctccgcgaggtcggtacg
accaaccgcacggcccccgccgactacgcggccgtcgtcgggccggacaccgggttcgtg
ctgaaggtgcacccgtccaacttccggatcaccggcttcacccggtccgccgatgtcgcc
gacctcaccggcctcggcgtgccggtcgtcgtcgacatcggctccgggctgctcgcgccc
cacccggccctgcccgaggagcccgacgccgacacccagctgcgcgccggcgccgcgctc
gtcaccgcgagcggcgacaaactgctcggcggaccccagtgcgggctgctgctcggccgg
gaggacctggtccgcaccctcgcccggcacccgctggcccgcgccctgcgcgtcgacaag
ctgaccctggccgccctggaggccaccctcaccggcccgcccacccccaccgccctcgcc
ctcgccgccgacccggcccggctccgggcccgcgccggccgactcgccgccgggctggcc
gccgacgggatcgacgtcctggccgtcgagagcgccgcgacggtcggcggcggaggtgcc
cccggcgtcaccctgcccagcgccgccctctccctgcccgaaccgtacgccgccgcactg
cgcaccggccgtatccccgtcgtcggccgcctggagacgggccgctgcctgctggacctc
agggcggtgcccccggaggacgacgaccggttggccgaggccgtacggtcggcgcggccg
gtggcggagggacggggaaagtga
DBGET
integrated database retrieval system
