Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_2183
Help
Entry
SHJG_2183 CDS
T02063
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_2183
Enzymes [BR:
shy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SHJG_2183
DNA repair and recombination proteins [BR:
shy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SHJG_2183
Prokaryotic type
SHJG_2183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEY87458
LinkDB
All DBs
Position
2645007..2646383
Genome browser
AA seq
458 aa
AA seq
DB search
MDVSVVLFTADLRLYDHPPLRAALDGPRQVVPLFVRDRGVADAGFAAPNRLAFLADCLRD
LDTGLRERGGRLVVRSGDVVEQVCAVAAEADADEVHMATDASAYARSRERRLRRALEAEG
RRLHVHEAVTTVVPPGEVTPASSDHFAVFTPYFRQWSRQRPRDVLGAPRSVPVPPGIGSE
ELPSRASLPGTSPGLAEGGEAAGRKRLAAWLRSGMALYADRHDDLAGDATSRLSPHLHFG
TVSPVELVHRARRADGPGAEAFVRQVAWRDFHRQVLAARPGAAVADYRTRHDRWRSERTA
REDIEAWREGRTGWPVIDAAMRQLRHEGWMHNRARLLTASFLAKTLYVDWRVGARHFLEW
LVDGDLANNQLNWQWVAGTGTDTRPNRVLNPLIQARRYDPDGVYVRRWVPELKEVAGAAV
HEPWKLRGPDRELVAAYPEPIVDLADGLARFRRARSRG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcggtcgtcctgttcaccgccgacctgcgcctgtacgaccatccgccgctc
cgggccgcgctggacggcccccgtcaggtcgtcccgctgttcgtccgcgaccggggcgtg
gccgacgcgggcttcgcggcacccaatcggctggcgttcctcgccgactgcctgcgggac
ctggacaccgggctccgtgagcgcggcgggcggctggtggtgcgctccggcgacgtcgtg
gaacaggtctgcgcggtggccgcggaggcggacgccgacgaggtgcacatggcgaccgac
gcgagtgcctacgcccggtcgcgggagcggcggctgcggcgcgccctggaggccgaaggg
cggcggctgcacgtgcacgaggccgtgaccacggtggtgccgcccggcgaggtgacccct
gcctcctcggaccacttcgcggtgttcacgccgtacttccggcagtggtcgcgacaacgg
ccgcgggacgtcctgggtgcgccccgctcggtccccgtgccgcccggcatcggctccgag
gagctgccgtcccgggcctcgctgccggggacctcgccggggctggcggagggcggcgag
gcggccggccggaagcggctcgccgcctggctccgctccggcatggcgctctacgcggac
cggcacgacgacctggccggggacgcgacctcccggctctccccgcacctgcacttcggc
acggtgtcccccgtcgagctggtccaccgggcgcgccgggcggacggtccgggagcggag
gcgttcgtacggcaggtcgcctggcgggacttccaccgtcaggtgctggcggcccggccc
ggcgcggccgtcgccgactaccgcacccggcacgaccgttggcggtcggagcggacggcc
cgggaggacatcgaggcgtggcgggagggccgtaccggctggccggtgatcgacgcggcg
atgcgccagctgcgccacgagggctggatgcacaaccgggcccggctgctgacggcgagc
ttcctggcgaagacgctgtacgtcgactggcgcgtcggggcccggcacttcctggagtgg
ctggtcgacggcgacctggccaacaaccagctgaactggcagtgggtcgcgggcaccggc
acggacacccgccccaaccgggtcctcaacccgctgatccaggccaggcggtacgacccc
gacggggtgtacgtgcggcggtgggtgcccgagctgaaggaggtggcgggcgcggcggtg
cacgagccgtggaagctgcgaggccccgaccgcgagctcgtcgccgcgtatccggagccg
atcgtcgacctcgccgacgggctggcccggttcagacgggcgcggagccgcggttga
DBGET
integrated database retrieval system
