KEGG   Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_2958
Entry
SHJG_2958         CDS       T02063                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shy  Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03030  DNA replication
shy03430  Mismatch repair
shy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SHJG_2958
   03430 Mismatch repair
    SHJG_2958
   03440 Homologous recombination
    SHJG_2958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shy03032]
    SHJG_2958
   03400 DNA repair and recombination proteins [BR:shy03400]
    SHJG_2958
Enzymes [BR:shy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SHJG_2958
DNA replication proteins [BR:shy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SHJG_2958
DNA repair and recombination proteins [BR:shy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SHJG_2958
SSDB
Motif
Pfam: RNase_T DEDDh_C
Other DBs
NCBI-ProteinID: AEY88232
LinkDB
Position
3497988..3498713
AA seq 241 aa
MTTWYEGPLAAFDTETTGVDVETDRIVSAAVVVQDAPGTRPRITRWLVNPGVPVPEAATA
VHGLTEEHVQRNGRWPAPVMYEIAEQLAEHAALGRPLVVMNAPFDLTLLDRELRRHRASS
LDRWLESVPLRVLDPRVLDKHLDRYRKGRRTLTDLCAHYGVTLQDAHDAAADALAAMDVV
RALGRRFAARLERLSPADLHTLQANWHAAQARGLQAWFARSGSEEVVSTEWPLRPELPAA
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgacgacctggtacgaggggccgctggccgccttcgacacggagacgacgggcgtggac
gtggagaccgaccggatcgtgtcggccgccgtcgtcgtccaggacgcgccggggacccgg
ccccggatcacccggtggctggtgaacccgggtgtgccggtgccggaggcggcgacggcg
gtgcacgggctgacggaggagcacgtgcagcgcaacgggcgctggccggccccggtgatg
tacgagatagccgagcagctcgccgagcacgcggcgctgggccggccgctggtggtgatg
aacgcgccgttcgatctgacgctgctggaccgggagttgcgccggcaccgggcgtcgtcg
ctggaccgctggctggagtcggtgccgctcagggtgctggacccgcgggtgctggacaag
cacctggaccggtaccgcaagggccggcgcacgctgacggacctgtgcgcgcactacggg
gtgaccctccaggacgcgcatgacgcggcggcggacgcgctggccgcgatggatgtcgta
cgggcgctgggccgccggttcgcggcccggctggagcgactgtcccccgccgacctgcac
accttgcaggcgaactggcacgcggcgcaggcacgggggttgcaggcgtggttcgcgcgc
agcggctcggaggaggtcgtcagcacggagtggccgctgcggcccgagctgccggcggcg
gcgtga

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