Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_3060
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Entry
SHJG_3060 CDS
T02063
Name
(GenBank) ribosomal pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shy03009
]
SHJG_3060
03016 Transfer RNA biogenesis [BR:
shy03016
]
SHJG_3060
Enzymes [BR:
shy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
SHJG_3060
5.4.99.29 23S rRNA pseudouridine746 synthase
SHJG_3060
Ribosome biogenesis [BR:
shy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SHJG_3060
Transfer RNA biogenesis [BR:
shy03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
SHJG_3060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEY88334
LinkDB
All DBs
Position
3601524..3602474
Genome browser
AA seq
316 aa
AA seq
DB search
MRRRTPPPPAPLPQREGVDPVRVRLPVDGAWATVREHLVERLTGAPAGVVESMFAAGLVV
GADGRAVAPDAPYRPGMFVWFHRELPAEVPVPFPVEVVYRDEHIVVADKPHFLATTPRGA
HVAETALARLRRELGIPALTAAHRLDRLTAGLVLFTVRPEERGAYQSLFRDRRVRKEYEA
VAPYDPALVLPRTVRSRIVKERGVPAAREVPGEPNAETRVELAGHRAGLGRYRLVPTTGQ
THQLRVHLTALGVPILGDPLYPEVTAPVPAGDFRRPLQLLARRLEFTDPVTGTEHTFTSA
RALLAWTSHEAWADGS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagacgccgtaccccgcccccgcccgccccgctcccccagcgcgagggcgtggacccc
gtccgcgtccggctgcccgtggacggggcgtgggccaccgtgcgggagcatctggtggag
cggctgacgggggccccggccggggtggtcgagtcgatgttcgccgccgggctggtggtc
ggggccgacgggcgggccgtggcgccggacgcgccgtaccggccggggatgttcgtctgg
ttccaccgcgagctgcccgccgaggtgccggtgccgttcccggtggaggtggtgtaccgg
gacgagcacatcgtggtggccgacaagccgcacttcctggccacgaccccgcgcggtgcg
cacgtcgccgagaccgcgctggcccggctccggcgtgagctgggcattccggcgctgacg
gcggcgcaccggctggaccggctgaccgccgggctggtgctgttcaccgtgcggcccgag
gagcggggcgcgtaccagtcgctcttccgggaccggcgggtgcgcaaggagtacgaggcg
gtggcgccgtacgatccggcgctcgtcctgccccggaccgtgcgcagcaggatcgtgaag
gagcgcggggtgccggccgcgcgggaggtgccgggcgagccgaacgcggagacccgggtg
gaactggccgggcaccgggccgggctcggccgctaccggctcgtgccgaccaccgggcag
acccaccagctccgggtgcacctgaccgcactgggcgtgcccatcctcggcgacccgctg
taccccgaggtgaccgccccggtaccggccggcgacttccgccgccccctgcaactgctc
gcccgcaggctggagttcaccgacccggtcaccggcacggaacacacgttcaccagcgcc
cgcgcgttgctcgcatggacgtcgcacgaggcctgggcggacgggtcctag
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