Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_3232
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Entry
SHJG_3232 CDS
T02063
Name
(GenBank) rRNA methylase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shy03009
]
SHJG_3232
Enzymes [BR:
shy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
SHJG_3232
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
SHJG_3232
Ribosome biogenesis [BR:
shy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SHJG_3232
23S rRNA modification factors
SHJG_3232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AEY88506
LinkDB
All DBs
Position
complement(3784325..3785140)
Genome browser
AA seq
271 aa
AA seq
DB search
MAGVARRRLDAELVRRKLARSREHASQLIAAGRVTVGRTVATKPATQVESAAAIVVQADD
SDPDYVSRGGHKLAGALAAFVPRGLVVEGRRALDAGASTGGFTDVLLRAGAAHVVAVDVG
YGQLAWSLQKDERVTVKDRTNVRELTLEAIDGEPVDLVVGDLSFIPLGLVLPALKRCVTA
DADLVMMVKPQFEVGKERLGSGGVVRSPQLRAEAVRGVAEKAWELGLGVRGVTASPLPGP
SGNVEYFLWLRAGAPQVDPADVERAVAEGPR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggagtcgcacgccgccgtctcgacgcggagctggtccgccggaagctcgcccgt
tcgcgcgagcacgccagccagctgatcgccgccgggcgggtcaccgtcggcaggaccgtg
gcgaccaagccggccacgcaggtggagtccgcggcggcgatcgtcgtccaggccgacgac
agcgatcccgactacgtctcccggggcgggcacaagctcgccggcgcgctggcggccttc
gtgccgcgggggctcgtcgtcgagggccggcgcgcgctggacgccggcgcgtccaccggc
ggcttcaccgacgtcctgctgcgcgcgggcgccgcccacgtcgtcgcggtggacgtcggc
tacggacaactcgcctggtcgctccagaaggatgaacgcgtcaccgtcaaggaccgtacg
aacgtacgcgagttgacgcttgaggcgatcgatggggaacctgtggatcttgtcgtgggc
gatctgtccttcatcccgctcgggctggtgctgcccgccctgaagcggtgcgtgacggcg
gacgccgacctggtgatgatggtcaagccgcagttcgaggtggggaaggagcggctcggc
agcgggggagtcgtacggagtccgcaactgcgggcggaggccgtgcgaggagtggccgag
aaggcgtgggagctggggctcggggtgcggggggtcaccgcgagcccgctgcccggcccc
tcggggaacgtggagtactttctctggctgcgggcgggggcaccccaggtggacccggcc
gacgtcgaacgtgcagtggcggaggggccgcgttga
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