Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_3458
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Entry
SHJG_3458 CDS
T02063
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHJG_3458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_3458
Enzymes [BR:
shy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SHJG_3458
DNA repair and recombination proteins [BR:
shy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHJG_3458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEY88731
LinkDB
All DBs
Position
complement(4023670..4024365)
Genome browser
AA seq
231 aa
AA seq
DB search
MDDSSALARLDRRVADCRACPRLVEWREEVARTKRAAFADWTYWGRPVPGFGPADARLAI
IGLAPAAHGGNRTGRMFTGDRSGDVLYQALYDVGLASQPTAVSADDGLELYGVRITAPVH
CAPPANKPTPGERDTCRPWLAQELTLLRPTLRAVVVLGAFGWQAALPAFAEAGWTVPRPR
PAFAHGTRVALDGLDLFGCFHVSQRNTFTGRLTADMLREVLRTAAEAAGLP
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcagtgccctcgcccggctcgaccggcgcgtcgcggactgccgggcgtgc
ccccggctggtcgaatggcgtgaggaggtggcccgtacgaagcgggcggcgttcgccgac
tggacgtactgggggcggccggtgcccgggttcgggccggccgacgcgcggctggcgatc
atcgggctggccccggccgcgcacggcgggaaccgcaccggccggatgttcaccggggac
cgttcgggagacgtgctgtaccaggcgctgtacgacgtggggctcgcctcgcagcccacc
gcggtcagcgccgacgacgggcttgagctgtacggcgtgcggatcacggcgcccgtgcac
tgcgcgccgcccgccaacaagccgacgccgggtgagcgcgacacctgccgcccctggctg
gctcaggagctcaccctgctccggccgaccctgcgggccgtggtcgtgctcggcgccttc
ggctggcaggccgcgctgcccgcgttcgcggaggcgggctggaccgtgccccgcccccgc
ccggccttcgcccacggcacccgggtcgcgctcgacggcctcgacctcttcggctgcttc
cacgtcagccagcgcaacaccttcaccggccggctcaccgccgacatgctccgcgaggtg
ctgcgcacggcggcggaggcggccggactgccgtag
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