Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_3595
Help
Entry
SHJG_3595 CDS
T02063
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHJG_3595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_3595
Enzymes [BR:
shy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SHJG_3595
DNA repair and recombination proteins [BR:
shy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SHJG_3595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AEY88867
LinkDB
All DBs
Position
4178568..4179392
Genome browser
AA seq
274 aa
AA seq
DB search
MAGGLHSVGLSYARDLKAETVQVFVANPRGWATPAGNPRQDEAFRAACAEESVPAYVHAP
YLINFGSHTEATVERSVESLRHSLRRGREIGALGVVVHTGSATGGRTREVALKQVRARLL
PLLDELTHDDDPFLLLESTAGQGASLCSRTWDFGPYFEALDAHPKLGVCLDTCHIFAAGH
DLTGPDGMHRTLDLLVDTVGPGRLKLIHANDSKDVAGAHKDRHENIGAGHIGEDPFRALM
THPATEGVPLVIETPGGKEGHAADVERLKKLRED
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtggccggtggtctgcactccgtcgggctgtcgtacgcccgtgacctgaaggccgagacc
gtgcaggtcttcgtcgccaatccgcgcggctgggccacgcccgccgggaacccgcggcag
gacgaggcgttccgcgcggcctgcgccgaggagtcggtcccggcgtacgtgcacgcgccg
tacctgatcaacttcggctcgcacaccgaggcgaccgtggagcggtcggtggagtcgctg
cggcactcgctgcggcgcgggcgggagatcggcgcgctgggtgtcgtggtgcacaccggg
agcgccaccggcgggcggacgcgggaggtcgcgctgaagcaggtgcgcgcgcgtctgctg
ccgctgctggacgagctgacccacgacgacgacccgttcctgctgctggagtcgaccgcc
gggcagggcgcctcgctgtgctcgcggacctgggacttcgggccgtacttcgaggcgctg
gacgcgcatccgaaactcggcgtgtgcctggacacctgccacatcttcgccgccgggcac
gatctgaccgggccggacggcatgcacaggaccctggacctgctggtggacaccgtcggc
ccgggccggctgaagctgatccacgccaacgactccaaggatgtggcgggcgcccacaag
gaccggcacgagaacatcggcgccggccacatcggggaggacccgttccgggcgctcatg
acccaccccgcgaccgagggagtgccgctggtcatcgagacgcccggcggcaaggagggg
cacgcggcggacgtggagcggctgaagaaactccgcgaggactga
DBGET
integrated database retrieval system
