Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4013
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Entry
SHJG_4013 CDS
T02063
Name
(GenBank) neuramidase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00511
Other glycan degradation
shy00600
Sphingolipid metabolism
shy01100
Metabolic pathways
shy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
SHJG_4013
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SHJG_4013
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
SHJG_4013
Enzymes [BR:
shy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
SHJG_4013
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Motif
Other DBs
NCBI-ProteinID:
AEY89285
LinkDB
All DBs
Position
complement(4625412..4626629)
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AA seq
405 aa
AA seq
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MTPRSRSLLTSLALLAPLTAGLPAHAASADCASSVPYVSGRGGYAVYRIPAVVETRHGTV
LAFAEGRRDGAGDTGDIDVVLRRSADGGCTWGPLTVVAAGRGHTRGNPAPVVDPRTGAVV
LVTCANAGTVTEARIMRGEAAPEQGRRIFVQRSRDDGRSFTAPRDITARVTRSGWRWYAT
GPGHAVALTRGPHAGRLLIPADHSAAPPAGSPDTGQEARYYGGHALYSDDSGRTWHLGFV
DADHDGVTNANETSAAQLPDGRVYFSSRDQNGTAPGNRLDTYSGDGGRTLDRPYAVQPAL
NAVPVVQGSVLQPRDPGAPLLFSAPSVPTARRAPALWASTDAGRTFRRLLTLSDQPAAYS
DLVQLAPGTIGVLYETGVRGPYESLEFRRLRLDAPGPGGGVRERT
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccgcgcagccgttccctcctcaccagcctggcgctcctcgccccgctcaccgcc
gggctgcccgcccacgcggcgtccgccgactgcgcctcctcggtgccgtacgtgtccggg
cggggcgggtacgccgtctaccgcatcccggccgtggtggagacccggcacggtaccgtc
ctggccttcgccgagggccggcgcgacggcgcgggagacaccggtgacatcgacgtcgtc
ctgcgtcgctccgccgacggcggctgcacctggggcccgctgaccgtggtggccgccggg
cggggccacacccggggcaacccggcgcccgtggtcgacccgcgcaccggcgcggtggtc
ctggtcacctgcgccaacgcggggaccgtgacggaggcgcggatcatgcgcggcgaggcc
gccccggaacagggccgccgcatcttcgtgcagcgcagccgggacgacggccgcagcttc
accgccccccgggacatcacggcccgggtgacccggtccggctggcgctggtacgccacc
ggccccggtcacgccgtcgccctcacccgcggcccccacgccggccgcctgctgatcccc
gccgaccactccgcggccccgcccgccggctccccggacaccggccaggaggccaggtac
tacggcggacacgccctctacagcgacgactccggccgcacctggcacctggggttcgtg
gacgcggaccacgacggcgtgaccaacgccaacgagaccagcgccgcccaactgcccgac
ggccgcgtctacttcagctcacgcgaccagaacggcaccgcccccggaaaccgcctcgac
acctactccggcgacggcggccggaccctggaccgcccctacgccgtccagcccgccctg
aacgccgtcccagtggtccagggcagcgtcctccagccgcgcgacccgggcgcgcccctg
ctgttctccgcgccctccgtgccgaccgcacggcgcgccccggccctctgggcgagcacg
gacgccggccgcaccttccgcaggctgctcaccctctccgaccagccggccgcctactcc
gacctggtccagctcgcccccggcacgatcggcgtcctgtacgagaccggcgtccggggc
ccgtacgagtccctggagttccgcagactccgcctggacgctccggggccgggcggcggg
gtccgagagaggacctag
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