Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4056
Help
Entry
SHJG_4056 CDS
T02063
Name
(GenBank) DNA-binding protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03030
DNA replication
shy03430
Mismatch repair
shy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHJG_4056
03430 Mismatch repair
SHJG_4056
03440 Homologous recombination
SHJG_4056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shy03032
]
SHJG_4056
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_4056
Enzymes [BR:
shy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHJG_4056
DNA replication proteins [BR:
shy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHJG_4056
DNA repair and recombination proteins [BR:
shy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHJG_4056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
QatB
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AEY89328
LinkDB
All DBs
Position
complement(4666802..4667791)
Genome browser
AA seq
329 aa
AA seq
DB search
MARKTANDDPLAPVTLAVGQEDLLLDRAVQEVVAAAKAADADTDVRDLTPDQLQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADTVKDVRAYLGSPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRGEFRSSGRSATPEACQTLCDAIGSDLRELASAVSQLV
ADVEGTIDEAVVRRYYTGRAEASSFTVADRAVEGRTAEALEALRWSLATGVAPVMITSAL
AQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVAVALRAVAEADAG
VKGGGDDPEYALEKAVVTIARAARSRGRG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagactgcgaatgacgaccctctcgccccggtgaccctcgccgtgggccag
gaggacctcctgctcgaccgtgccgtgcaggaggtggtggccgccgccaaggccgccgac
gccgacacggacgtacgtgacctgaccccggaccagctacagcccggcacactcgccgag
ctgaccagcccgtcgctcttcgccgagcgcaaggtcgtggtcgtacgcaacgcgcaggac
ctgtccgccgacacggtcaaggacgtgagggcgtacctcggttcgcccgccgaggagatc
acgctggtgctgctgcacgccggcggcgccaagggcaaagggctgctggacgccgcgcgc
aaggcgggggcgcgggaggtggcctgcccgaagatgaccaagcccgcggatcggctggcc
ttcgtgcggggggagttccgttcgtccgggcggtcggccacgcccgaggcgtgccagacg
ctctgcgacgccatcgggagcgatctgcgggagctggcctcggcggtctcgcagttggtc
gccgacgtggaagggacgatcgacgaggcggtcgtcaggcggtactacaccgggcgtgcc
gaggcgtccagcttcacggtcgccgaccgggccgtggagggccggacggcggaggcgctg
gaggcgctcagatggtcgctggcgacgggcgtggcgccggtgatgatcaccagtgcgctg
gcgcagggcgtgcgggcgatcgggaagctgtcctcggcccggggcggccggccggccgat
ctggcgcgtgagctgggcatgccgccgtggaagatcgaccgggtacggcagcagatgcgg
ggctggacgccggacggggtcgcggtggcgctcagggcggtcgccgaggcggacgccggg
gtgaagggaggcggggacgatcccgagtacgcgttggagaaggcggtcgtgacgatcgcc
cgcgccgcccgctcccgcggacgcggatag
DBGET
integrated database retrieval system
