Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4539
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Entry
SHJG_4539 CDS
T02063
Name
(GenBank) lysine/ornithine decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00300
Lysine biosynthesis
shy00470
D-Amino acid metabolism
shy01100
Metabolic pathways
shy01110
Biosynthesis of secondary metabolites
shy01120
Microbial metabolism in diverse environments
shy01230
Biosynthesis of amino acids
Module
shy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHJG_4539
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHJG_4539
Enzymes [BR:
shy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SHJG_4539
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AEY89810
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Position
5231555..5232958
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AA seq
467 aa
AA seq
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MAEIETVGDIGSEARGRAARRDRAVRAAVERGLLGPDAAVVGLLDVVGIRESAAALRAAF
DAVVPPGTPVLHAFAVKATPLVPVVRLLHEAGIGAEVASPGELALARTAGVPPARTVLDS
PAKTPAELREALALGIAVNADNPQELDRLDALVRAAPTRSPLGLRVNPQIGGGTIGATST
ATRTSKFGVALRDAGARDWVVRAYAERPWLTRLHAHTGSQGIPLPLLARGVAEVYALAEE
INAVVGRRQVDTVDIGGGLPVNLASEETTPSYAAYARLLAEQVPGLFDGRYGLVTEFGRS
LLAKYGTVVARVEYAKSAGGRRIAVTHAGVQVATRTVYVPGAWPLRIAAYDAGGRPKAGP
EVVQDVAGPACFSGDLLAEGRALPLLEQGDYAAALDTGAYYFAHHYAYNSLARPGIHGYA
PDGEGGVAFATVREPQTVAEVVAESGGAHASALTGLPGATGGHPAPR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtggcggagatcgagacggtcggggacatcgggagcgaggcgcgggggcgggcggcccgc
cgggaccgggccgtgcgggccgccgtcgagcggggactgctgggtccggacgcggccgtg
gtgggcctgctggacgtcgtcggcatccgggagtcggcggcggcgctgcgggcggcgttc
gacgcggtcgtgccgcccggcacaccggtgctgcacgccttcgcggtgaaggcgaccccg
ctggtgccggtggtgcggctgctgcacgaggcgggcatcggcgcggaggtggcgagcccc
ggcgagctagcgctggcccggacggccggggtgccgcccgcccggacggtgctggactcg
ccggccaagaccccggccgagttgcgcgaggcgctggccctgggcatcgcggtgaacgcg
gacaacccgcaggagctggaccggctcgacgccctcgtgcgcgccgcgcccacccggtcc
ccgctcgggctccgggtcaacccgcagatcggcggcggcaccatcggggcgacctccacg
gcgacgcggacctcgaagttcggggtggcgctgcgggacgcgggggcgcgcgactgggtc
gtccgggcgtacgcggagcggccgtggctgacccggctgcacgcgcacaccggctcgcag
ggcatcccgctgccgctgctggcgcggggcgtggcggaggtgtacgcgctcgcggaggag
atcaacgcggtcgtcgggcggcggcaggtcgacacggtcgacatcggcggcggcctgccg
gtgaacctcgcgtcggaggagacgacaccgtcgtacgccgcctacgcgcggctgctcgcc
gagcaggtgccggggctgttcgacgggcggtacgggctggtgaccgagttcgggcggtcg
ctgctggccaagtacgggacggtggtggcccgggtggagtacgccaagagcgcgggcggg
cggcggatcgcggtgacgcacgcgggcgtgcaggtggcgacgcggacggtgtacgtgccc
ggggcgtggccgctgcggatcgccgcgtacgacgccggggggcggccgaaggcggggccg
gaggtggtgcaggacgtggccgggccggcctgcttctcgggcgacctgctcgccgaggga
cgcgcgctgccgctgctggagcagggcgactacgcggcggcgctggacacgggcgcgtac
tacttcgcccaccactacgcgtacaactccctcgcccggccgggcatccacggctacgcg
ccggacggcgaggggggcgtcgccttcgccaccgtacgggagccgcagaccgtcgcggag
gtggtggcggagtcgggaggggcgcacgcgtccgcgctgaccggcctgccgggcgccacc
ggcgggcaccccgcgccgcggtga
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