Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4779
Help
Entry
SHJG_4779 CDS
T02063
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shy03016
]
SHJG_4779
Enzymes [BR:
shy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SHJG_4779
Transfer RNA biogenesis [BR:
shy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SHJG_4779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
aGPT-Pplase3
Imm32
Motif
Other DBs
NCBI-ProteinID:
AEY90048
LinkDB
All DBs
Position
complement(5500993..5501565)
Genome browser
AA seq
190 aa
AA seq
DB search
MRLFAAVLPPGDVVEELAAEVTRLRRLPGAGRLRWTARPGWHFTLAFYGEVADDVVPALS
DRLARAAHRTAPFPLSLAGGGQFGRGRALWTGARGDVEALRLLADRAEAAARKAGVPMGE
HRRYTAHLTLARSRDAVDVRPYVAALTEFAGESWTVADLALVRSRLPTSGVPGEQPRYEV
VERWALGGAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgccgtgctgcctcccggggacgtcgtggaggaactcgccgcggag
gtgacccggttgaggcggctgccgggcgccggccggctgcgctggaccgcccgccccggc
tggcacttcaccctcgcgttctacggcgaggtcgccgacgacgtcgtacccgccctgtcg
gaccgcctggcccgcgcggcccaccgtacggcccccttcccgctctcgctcgcgggcggc
ggccagttcggccggggccgggcgctgtggacgggcgcccggggggacgtggaggcgctg
cggctgctggccgaccgggcggaggcggcggcgcggaaggccggggtgccgatgggggag
caccggcgctacacggcccatctgacgctggcccgcagccgggacgcggtggacgtacgg
ccgtatgtggcggcgctcacggagttcgccggcgagagctggaccgtggccgacctggcg
ctggtgcgcagccggctgccgacgtccggggtgccgggggagcagccgcggtacgaggtg
gtcgaacggtgggcgctgggcggggccggttag
DBGET
integrated database retrieval system
