Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4822
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Entry
SHJG_4822 CDS
T02063
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SHJG_4822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shy03019
]
SHJG_4822
03110 Chaperones and folding catalysts [BR:
shy03110
]
SHJG_4822
03029 Mitochondrial biogenesis [BR:
shy03029
]
SHJG_4822
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shy04147
]
SHJG_4822
Enzymes [BR:
shy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SHJG_4822
Messenger RNA biogenesis [BR:
shy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SHJG_4822
Chaperones and folding catalysts [BR:
shy03110
]
Heat shock proteins
HSP60 / Chaperonin
SHJG_4822
Mitochondrial biogenesis [BR:
shy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SHJG_4822
Exosome [BR:
shy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SHJG_4822
Exosomal proteins of other body fluids (saliva and urine)
SHJG_4822
Exosomal proteins of breast cancer cells
SHJG_4822
Exosomal proteins of colorectal cancer cells
SHJG_4822
Exosomal proteins of bladder cancer cells
SHJG_4822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
DUF5021
Motif
Other DBs
NCBI-ProteinID:
AEY90091
LinkDB
All DBs
Position
complement(5548657..5550279)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFATDMERMEAVLEDPYILIANSKISSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGEVIS
EEVGLKLENATLDLLGRARKVVITKDETTIVDGAGSSEQVNGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SQVFEKLELEGDEATGANAVRIALEAPLKQIAVNAGLEGGVVVEKVRNLTPGHGLNAATG
EYVDLVAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggccttgagcgcggtatgaac
cagctcgccgacgccgtcaaggtcaccctcggccccaagggccgcaacgtcgtccttgag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgaa
ctggaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgtgctcgcccaggccctggtcaag
gaaggcctgcgcaacgtcgccgccggcgccaacccgatggctctgaagcgcggtatcgag
aaggccgtcgaggccgtctccgccgccctgctggagcaggcgaaggacgtcgagaccaag
gagcagatcgcctccaccgcgtccatctccgccgccgacacccagatcggcgagctgatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtccaacacc
ttcggtcttgagctggagctcaccgagggcatgcgcttcgacaagggctacatctccgcc
tacttcgcgaccgacatggagcgcatggaggcggtgctggaggacccgtacattctcatc
gccaactccaagatctcctcggtcaaggacctgctcccgctgctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggcccccggcttcggt
gaccgccgcaaggccatgctcggcgacatcgccatcctcacgggcggcgaggtcatctcc
gaggaggtcggcctcaagctggagaacgcgaccctggacctcctgggccgcgcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgacggtgccggctcctccgagcaggtc
aacggccgtgtgaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctccaggagcgcctggcgaagctcgccggcggtgtcgcggtcatcaaggccggt
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccaggcc
tcccaggtcttcgagaagctggagctggagggtgacgaggcgaccggcgccaacgccgtg
cgcatcgccctggaggccccgctgaagcagatcgccgtcaacgccggccttgagggcggc
gtcgtggtggagaaggtgcgcaacctgaccccgggtcacggcctgaacgccgcgaccggc
gagtacgtcgacctggtcgccgagggcatcatcgacccggcgaaggtgacccgttccgcg
ctgcagaacgccgcctccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgcggccccggccggcggcggcatgccgggcggtgacatggacttc
tga
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