Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4982
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Entry
SHJG_4982 CDS
T02063
Name
(GenBank) ATP-dependent RNA helicase
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEY90250
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All DBs
Position
complement(5720344..5722437)
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AA seq
697 aa
AA seq
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MSVSSTDQIVVSENEIEIENTTEIENALVDETTEVTEAPEAADTPQTTFADLGLPEGIVR
KLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLAQLAGGRTQKHKPR
AVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGVDILVATPGRLR
DIINRGACSLEDVRIAVLDEADQMSDLGFLPEVTELLDQVPAGGQRMLFSATMENEIKTL
VDRYLDEPVLHEVDAAQGAVTTMSHHILIVKPKDKAPVTAAIASRKGRTIIFVRTQLGAD
RVAEQLREAGVKADALHGGMTQGARTRTLADFKDGYVNVLVATDVAARGIHVDGIDLVLN
VDPAGDHKDYLHRAGRTARAGRTGTVVSLSLPHQRRQIFRLMEDAGVDAARHIIQGGAAF
DPEVAEITGARSMTEVQAESAANAAQQAEREVAQLTKQLERAQRRATELREEADRLVARV
ARERGDDPEAAVAEAQATAAEQLAVAEEPAERETEREERPAASAPYERRERRGFDRDRGF
ERRDERRDDRGGRSFERREDRGERRPFDRDRDRDRGFERRDDRRDDRGGRGFERRDDRRD
DRGGRGFERRDDRGERRPFDRDRGGRSFERRDDRSGFRRDERGGHRGSDRPFNRDRRDDR
PGFRSAGHDRPYGRRDDHRGTGSFGRREDKPRWKRNG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtccagtactgaccagatcgtcgtgtccgagaacgagatcgagatcgagaac
accaccgagatcgagaacgcactcgtcgacgagacgaccgaggtcaccgaggcccccgag
gccgctgacaccccccagaccaccttcgccgacctcggcctccccgagggcatcgtgcgc
aagctcgcgcagaacggcgtgacgacccccttcccgatccaggccgcgaccatcccggac
gccctggccggcaaggacatcctcggccgtggccgcaccggctccggcaagaccctctcc
ttcggcctgccgaccctggcccagctggccggcggccgtacccagaagcacaagccccgc
gcggtcatcctcaccccgacccgagagctggccatgcaggtcgccgacgccctccagccg
tacggcgacgtcctcggcctgaagatgaaggtcgtctgcggcggcacctccatgggcaac
cagatctacgccctggagcgcggcgtcgacatcctcgtcgccacgccgggccggctgcgc
gacatcatcaaccgcggcgcctgctccctggaggacgtgcggatcgccgtcctggacgag
gccgaccagatgtccgacctgggcttcctgcccgaggtcaccgagctgctcgaccaggtc
ccggccggcggccagcgcatgctcttctccgccacgatggagaacgagatcaagaccctc
gtcgaccgctacctcgacgagcccgtcctgcacgaggtggacgcggcccagggcgcggtg
acgaccatgtcgcaccacatcctcatcgtgaagcccaaggacaaggcgccggtcaccgcc
gcgatcgcctcccgcaagggccgcacgatcatcttcgtccgcacccagctgggcgccgac
cgcgtcgccgagcagctgcgcgaggccggcgtgaaggccgacgcactgcacggcggcatg
acccagggcgcccgtacccgcaccctggccgacttcaaggacggctacgtcaacgtcctg
gtcgccaccgacgtcgccgcgcgcggcatccacgtcgacggcatcgacctggtcctcaac
gtggacccggccggcgaccacaaggactacctgcaccgcgcgggccgtaccgcccgggcc
ggccgcaccggcacggtcgtgtcgctctccctcccgcaccagcggcgccagatcttccgc
ctgatggaggacgccggcgtcgacgcggcccgccacatcatccagggcggcgccgccttc
gacccggaggtcgccgagatcaccggcgcccgctccatgaccgaggtccaggccgagtcc
gccgccaacgccgcccagcaggccgagcgcgaggtcgcccagctcaccaagcagctggag
cgcgcccagcgccgcgcgacggagctgcgcgaggaggccgaccggctggtcgcccgggtc
gcccgcgagcgcggcgacgacccggaggcggcggtggccgaggcccaggcgacggcggcg
gagcagctcgccgtggccgaggagcccgcggagcgcgagaccgagcgcgaggaacgtccg
gcggcttcggcgccgtacgagcgccgggagcggcggggcttcgaccgtgaccgtggtttc
gagcgtcgtgacgagcgtcgggacgaccgtggtggccgttccttcgagcgtcgtgaggac
cggggcgagcgccgtccgttcgaccgcgaccgggaccgcgaccgtggcttcgagcgtcgt
gacgaccgccgggacgaccggggtggccgtggcttcgagcgccgcgacgaccgccgcgac
gaccgtggtggccgtggcttcgagcgccgtgacgaccggggcgagcgccgtccgttcgac
cgcgaccgtggtggccgttccttcgagcgccgtgacgaccggagcggcttccgccgcgac
gagcgcggtggccaccggggcagcgaccgtccgttcaaccgcgaccgccgcgacgaccgc
ccgggcttccggtccgccggtcacgaccgcccctacggccgtcgtgacgaccaccgcggc
accggctccttcggccgccgcgaggacaagccgcgctggaagcgcaacggctga
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