Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5280
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Entry
SHJG_5280 CDS
T02063
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00450
Selenocompound metabolism
shy00970
Aminoacyl-tRNA biosynthesis
shy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SHJG_5280
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHJG_5280
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shy01007
]
SHJG_5280
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shy03016
]
SHJG_5280
Enzymes [BR:
shy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
SHJG_5280
Amino acid related enzymes [BR:
shy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SHJG_5280
Transfer RNA biogenesis [BR:
shy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SHJG_5280
Prokaryotic type
Other AARSs
SHJG_5280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
AEY90548
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Position
complement(6046455..6048071)
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AA seq
538 aa
AA seq
DB search
MAATGSEKQGGKAYYVSTPIYYVNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWYLTGTDE
HGQKIMRTAEANGVTPQQWADKLVTEAWKPLWEHLEIANDDFIRTTQKRHTDRVQEFVQD
LYDKGEIYKGGYEGPYCVGCEEYKLPGELLDGEGEYAGQKLCPIHKKPVEILSEENYFFK
LSEYTDKLLAHYEANPGFIQPESARNEVVNFVRQGLQDLSISRSTFDWGIPIPWDDKHVI
YVWVDALLNYATAVGYNENQEKFEATFPADVHLVGKDILRFHAVIWPAMLMAQGLPLPGR
IAANGWLMVGGEKMSKSNLTGIKPQDLTSHFGVDAYRWYFLRAIAFGQDGSFSWEDFSAR
YTSELANDFGNLASRVAAMVGKYFGGTLPASAADGEAEKAIHDGLAKAVAEADRRIGEEL
DFQGGILAVFDFVKQVNGYITEQEPWKVAKDESEEGRARLATILYTAAEALRAVAVLLNP
VMPQTSQKLWESLGAEAGLGALAGQRIQDAGEWGKLPAGSTITKGAVLFPRLEEKPAA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcggccactggatccgagaagcagggtggcaaggcgtactacgtctccacccccatc
tactacgtcaacgacgctcctcacctgggccacgcctacacgaccgtcgcaggcgacgtg
ctcacccgctggcaccgtcagcgcggcgagaaggtgtggtacctcaccggcacggacgag
cacggtcagaagatcatgcgcacggccgaggcgaacggggtcacgccccagcagtgggcg
gacaagctcgtcaccgaggcctggaagcctctctgggagcacctggagatcgcgaacgac
gacttcatccgcaccacgcagaagcggcacaccgaccgcgtccaggaattcgtccaggac
ctgtacgacaagggcgagatctacaagggcggctacgagggcccgtactgcgtcggctgc
gaggagtacaagctccccggcgaactgctcgacggcgagggcgagtacgcgggccagaag
ctgtgcccgatccacaagaagccggtggagatcctcagcgaggagaactacttcttcaag
ctgagcgagtacaccgacaagctcctcgcccactacgaggccaacccgggcttcatccag
cccgagtccgcgcgcaacgaggtcgtgaacttcgtccgccagggcctccaggacctctcc
atctcccgctcgaccttcgactggggcatcccgatcccctgggacgacaagcacgtgatc
tacgtgtgggtcgacgcgctgctcaactacgccacggcggtcggctacaacgagaaccag
gagaagttcgaggccacgttccccgccgacgtccacctggtcggcaaggacatcctccgc
ttccacgcggtgatctggcccgccatgctgatggcgcagggtctgccgctccccggcagg
atcgcggccaacggctggctgatggtcggcggcgagaagatgtcgaagtcgaacctgacc
ggcatcaagccgcaggacctcacctcgcacttcggcgtggacgcctaccgctggtacttc
ctgcgggccatcgccttcggccaggacggctccttctcctgggaggacttctccgcccgg
tacacctccgagctggccaacgacttcggcaacctcgcctcccgcgtggccgccatggtc
ggcaagtacttcggcggcacgctgccggcgtcggccgccgacggcgaggcggagaaggcg
atccacgacggcctggccaaggccgtggccgaggcggaccgccgcatcggcgaggagctg
gacttccagggcggcatcctggccgtcttcgacttcgtcaagcaggtcaacggctacatc
acggagcaggagccgtggaaggtggccaaggacgagtccgaggagggcagggcccgcctc
gcgacgatcctctacacggctgcggaagccctccgcgcggtggccgtgctgctgaacccg
gtcatgccgcagacctcccagaagctctgggagtccctgggcgcggaggccggcctcggc
gccctggccgggcagcggatccaggacgcgggcgagtggggcaagctgcccgcgggttcc
acgatcaccaagggcgcggtcctcttcccgcgccttgaggagaagccggccgcctga
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