Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5460
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Entry
SHJG_5460 CDS
T02063
Name
(GenBank) ATP-dependent RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
SHJG_5460
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Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
LRR_RPS2
Motif
Other DBs
NCBI-ProteinID:
AEY90728
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Position
complement(6248429..6250648)
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AA seq
739 aa
AA seq
DB search
MIAAVQACGIEHPWAHQALAAEHALDGDSVVVATGTASGKSLAYLVPVLSTLLDGAEAPN
GRGATALYLSPTKALAADQCRSVKELSQPLGTSVRPAVYDGDTPFEEREWIRQYGNYVLT
NPDMLHRGILPSHPRWSSFLRSLKYVVIDECHTYRGVFGSHVAQVLRRLRRLCARYGSFP
VFLLASATAAEPAVAARRLTGLPVVEVADDASPRGELVFALWEPPLTELHGERGAPVRRT
ATAETADLLTDLTVQGVRSVAFVRSRRGAELIAVIAQERLAEVDRSLARRVAAYRGGYLP
EERRALERALHSGELLGLAATTALELGVDVSGLDAVVISGYPGTRASLWQQAGRAGRSGQ
GALAVLVARDDPLDTFLVHHPEALFDQPVESTVLDPDNPYVLAPHLCAAAAELPLTEEDL
DLFGPACADVLPQLEAAKLLRRRTKAWHWTRRERAADLTDIRGTGGRPVQVVEAGTGRLL
GTVDAGAAHSAVHEGAVHLHQGRTYLVRSLDLEDSVALVEQADPPYSTVARDTTSIAILE
TDTEIPWGAGRLCYGSVEVTNQVVSYLRRRLITGEVLGETKLDLPPRTLRTRAVWWTVTE
DQLDAARITPEILGGSLHAAEHASIGMLPLFATCDRWDIGGVSVPLHPDTLLPTVFVYDG
HPGGAGFAERAFHTARAWLTATREAIASCECEAGCPSCIQSPKCGNGNDPLHKRGAVRLL
TVLLRGAPEETDAGESAGG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcggccgtccaggcgtgcggcatcgagcatccctgggcgcaccaggcgctggcc
gccgagcacgccctggacggcgactccgtggtggtcgccaccggcaccgcctccggcaag
tccctcgcctacctcgtgcccgtcctgtccaccctcctggacggcgcggaagccccgaac
ggccgtggcgccaccgccctctacctgtcccccaccaaggcgctcgcggcggaccagtgc
cgatcggtgaaggaactttcacaacccctcggcacatccgtacgaccggccgtgtacgac
ggcgacaccccgttcgaggaacgggagtggatccgccagtacggcaactacgtcctgacc
aacccggacatgctgcaccgcgggatactcccctcccatccgcgctggtcctccttcctg
agatcgctcaagtacgtcgtcatcgacgagtgccacacctaccggggcgtcttcggctcg
cacgtcgcccaggtgctgcgccgactgcgccgcctgtgcgcccgctacggctccttcccc
gtgttcctgctggcctcggcgaccgccgcggagcccgcggtcgccgcccgccggctcacc
ggcctgccggtcgtcgaggtcgccgacgacgcctccccgcgcggagagctggtgttcgcc
ctctgggagcccccgctcaccgaactgcacggcgagaggggagcacccgtacggcgtacc
gccaccgccgagaccgccgacctgctgaccgacctcaccgtgcaaggtgtgcgctcggtc
gccttcgtacgctcccggcgcggcgccgagctgatcgcggtcatcgcccaggagagactc
gccgaggtcgaccgctccctggcccggcgtgtcgcggcgtaccgcggcggctacctcccc
gaggagcgccgcgccctggaacgcgcactgcactccggcgagctcctcggcctcgccgcc
acgaccgccctggagctgggcgtggacgtctccggcctggacgcggtggtgatctccggt
tacccgggcacccgcgcctccctgtggcagcaggccggccgcgcgggccgctccggccag
ggcgccctcgcggtcctcgtcgcccgcgacgacccgctggacaccttcctcgtccaccac
cccgaggccctgttcgaccagccggtggaatccacggtcctcgaccccgacaacccctac
gtcctcgccccgcacctgtgcgccgccgccgcggagctgccgctgaccgaggaggacctg
gacctcttcggccccgcctgcgcggacgtcctgccgcagctggaggccgcgaagctgctg
cgccggcgcaccaaggcctggcactggacccgtcgggagcgggccgccgacctcaccgac
atccgcggcaccggcggccgtccggtgcaggtcgtcgaggccggcacgggccgcctgctc
ggcacggtcgacgcgggcgccgcgcactccgccgtccacgaaggcgccgtccacctgcac
cagggccgcacctatctggtgcgctccctggacctggaggactccgtcgccctggtcgag
caggcggacccgccgtactcgacggtcgcccgcgacaccacgtccatcgccatcctggag
acggacaccgagatcccgtggggcgccggccgcctgtgctacggctcggtggaggtcacc
aaccaggtggtctcctacctccgccgccgcctcatcaccggcgaagtgctgggcgagacg
aaactcgacctccctcctcgtacgctgcgcacgcgcgcggtgtggtggacggtcaccgag
gaccagttggacgcggcccggatcaccccggagatcctcggcggctccctgcacgccgcc
gaacacgcctccatcggcatgctgcccctcttcgcgacctgcgaccgctgggacatcggc
ggcgtgtccgtgcccctgcaccccgacaccctcctccccacggtcttcgtctacgacggc
caccccggcggcgccggattcgccgagcgcgccttccacaccgcccgcgcctggctcacc
gccacccgtgaggccatcgcctcctgcgagtgcgaggccggctgcccgtcctgcatccag
tcccccaagtgcggcaacggcaacgacccactgcacaagagaggcgcggtacgactgctc
acggtgctgctgcgaggggcgccggaggagacggacgcgggggaatcggcgggagggtag
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