Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5472
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Entry
SHJG_5472 CDS
T02063
Name
(GenBank) integrase (recombinase)
KO
K14059
integrase
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
SHJG_5472
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_M
Motif
Other DBs
NCBI-ProteinID:
AEY90740
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Position
complement(6268075..6269247)
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AA seq
390 aa
AA seq
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MRAKVKELEKQRAAGKVRKVGRPPTIEQWMDTFLNTVCARKVEDGSMAPRTLDDYRSKNQ
LYIVPGIGKHRIDRLAAEHLDKLYLELLRRPLASSTVLKVHRIISRALKVAMQREIVTRN
VATLLDAPSAEEVEIEPLTRDEARAVLAEAEQRRNGCRWSVALAMGLRQGEALGLRWQYL
DLDEGVMKVWWQLQRLTWRHGCEDPHACGAKHHRKACRKNCTAHKNYTRGCPKPCPKDCK
GHAKACPERTGGGLVFRPPKGRNKRTAPIPPPLIPLLKAQRTAQKRERLAAGELWEENDL
VFAQPNGRPIDPRRDWEEWQDILKSAGLEAKRVHDGRHTAGTLLTENGVGLRVVMELLGH
SQLRVTQRYTHVGSPLAEDAASKMGAALWG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgccaaggtcaaagagctggagaagcagcgggccgcgggcaaggtccggaaggtc
ggccgaccgccgaccattgagcagtggatggacaccttcctcaacaccgtgtgcgcgcgg
aaggtggaagacggttccatggccccccggacgctggacgactaccgcagcaagaaccag
ctgtacatcgtcccgggcatcggcaagcaccgcatcgaccgcctcgccgccgagcatctc
gacaagctctacctggagctgctgcgccgaccgctggccagctcaaccgtgctgaaggtt
caccggatcatctcgcgagcgctcaaggtggcgatgcaacgggagatcgtgacgcggaac
gtagcgaccctgctggatgcgccgtcggccgaagaggtcgagatcgagccgcttacgcga
gacgaggctcgggcggtactcgccgaagctgagcagcgccgcaacgggtgccgctggtcc
gtagccctcgcgatgggactgcggcagggggaggcgctcgggctgcgctggcagtacctg
gaccttgacgaaggcgtgatgaaggtctggtggcagcttcaacgtctcacctggcggcac
ggctgcgaggatccgcacgcctgcggcgcgaagcaccaccggaaggcgtgccggaagaac
tgcaccgcccacaagaactacacgcgcggttgccccaagccctgtccgaaggactgcaag
ggccatgccaaagcctgtcccgagcgaacagggggtggcctggtgtttcgtccccccaag
ggccgcaacaagcgcacggcgccgattcctccgccgctcatccccctgttgaaggcgcaa
cgcacggcgcagaagcgggagcggctggcggctggcgagttgtgggaagaaaacgatctg
gtcttcgctcagcccaacggtcggccgatcgacccgcgccgggactgggaggagtggcag
gacatcctcaagtccgcggggctcgaagcgaagcgcgtgcacgacgggcgccacaccgcc
ggcaccctgctgactgagaacggggtggggctccgagtcgtcatggaactgctcggccac
tcgcagctgcgcgttacgcagcgctacacccacgtcggctcaccactcgccgaggacgcc
gcttccaagatgggagccgcactgtgggggtag
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