Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5640
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Entry
SHJG_5640 CDS
T02063
Name
(GenBank) integral membrane protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHJG_5640
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shy01007
]
SHJG_5640
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shy03016
]
SHJG_5640
Enzymes [BR:
shy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SHJG_5640
Amino acid related enzymes [BR:
shy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SHJG_5640
Transfer RNA biogenesis [BR:
shy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SHJG_5640
Prokaryotic type
Other AARSs
SHJG_5640
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
Gram_pos_anchor
TauE
MASE6
Motif
Other DBs
NCBI-ProteinID:
AEY90907
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Position
complement(6439859..6441673)
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AA seq
604 aa
AA seq
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MSAPQTASEQRTTTARQPSPVPPRIPAPRRAVHVLSPRLLRIGGGHRLRTRAATATVWYL
RLLAVLNLAAVVSLPFREEVHEHNAGEYFTPYLATAGLVSAALALFLAVVMRRRKRAAWL
FNLLLAGPLFGLYAVALTRAPYREHAFNWASTALTGLFVAALLLGRREFDAIGDRSNPRL
ALATGIGGTLAGGGLGTLLVHTTNKATGAGLKDEIAYTLLRGISVGPLADHVTAVQAPRW
ADVIVNVLMAVVFLAVLYACFRAPRGACLLAEEDEHRLRGLLERHGERDSLGYFALRRDK
AVIFSPSGKAAIAYRVVGGVSLASGDPLGDPEAWPGAIDAWLAEARRHAWTPAVMGASEE
AGTVYARHGLDALEIGDEAIVDLADFTLEGRAMRVVRQAHNRVRRAGCTVRVRRHEDIPP
EEMAVLVDRADHWRDGATERGFSMALGRLGDPADGRCVMLECRDADGEPRALLSFVPWGE
RGLSLDLMRRDRACENGLMEYMVVELLLQAKELGIDRVSLNFAMFRSVFERGARLGAGPV
LRLWRSTLAFFSRWWQIESLYRANAKYRPVWEPRFLLFAKSSDIPRIGLASARAEGFLTL
PGRS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctccacagacggcgtccgaacaacggacgaccaccgcacgacagccgtccccg
gtcccgccgcggatccccgctccccgccgcgccgtccacgtcctctccccccgcctcctg
cgcatcggcggcggccaccggctgcgcacccgcgccgccacggccaccgtctggtacctg
cgcctgctggccgtgctgaacctggcggcggtcgtgtccctccccttccgcgaagaggtg
cacgaacacaacgcgggcgagtacttcaccccgtacctggccaccgccggtctggtctcg
gcggccctcgccctgttcctcgcggtggtgatgcgccgtcgcaaacgagccgcctggctc
ttcaacctcctcctcgccggccccctcttcggcctctacgccgtcgccctcacccgcgcc
ccctaccgcgagcacgccttcaactgggcctccaccgccctcaccggcctgttcgtcgcc
gccctgctgctcgggcgccgcgagttcgacgccatcggcgaccgctccaacccgcgtctg
gctctcgccaccggcatcggcggcaccctcgccggcggcggcctcggcacgctcctggtc
cacacgacgaacaaggccaccggcgccggcctcaaggacgagatcgcctacaccctgctg
cgcggcatcagcgtcggcccgctcgccgaccacgtcaccgccgtccaggccccccgctgg
gcggacgtcatcgtgaacgtcctgatggccgtggtgttcctcgcggtcctctacgcctgc
ttccgcgccccgcgcggcgcctgcctgctcgcggaggaggacgaacacaggctgcgcggc
ctgctggagcggcacggcgagcgcgactccctcggctacttcgccctgcgccgcgacaag
gccgtcatcttctcccccagcggcaaggcggccatcgcctaccgtgtcgtcggcggggtc
agcctcgcctccggcgacccgctcggcgaccccgaggcctggcccggcgcgatcgacgcc
tggctcgccgaggcccgccggcacgcctggaccccggccgtgatgggcgcgagcgaggag
gcgggcaccgtctacgcccggcacggcctggacgcgctggaaatcggcgacgaggcgatc
gtggacctcgccgacttcaccctcgaaggccgggccatgcgcgtggtccgccaggcccac
aaccgggtccgccgggccggctgcacggtccgcgtccgccgccacgaggacatcccgccc
gaggagatggccgtcctcgtggaccgcgccgaccactggcgggacggcgccaccgaacgc
ggcttctccatggccctcggccgcctcggcgacccggccgacggccgctgcgtgatgctg
gagtgccgggacgccgacggcgaaccccgcgccctgctcagcttcgtgccctggggcgag
cgcggcctctccctggacctgatgcgccgcgaccgcgcctgcgagaacggcctgatggag
tacatggtcgtcgaactgctcctccaggcgaaggagctggggatcgaccgggtctcgctg
aacttcgcgatgttccgctcggtcttcgaacgcggcgcccgcctcggcgcgggcccggtg
ctgcgcctgtggcgctcgaccctcgccttcttctcccgctggtggcagatcgagtccctc
taccgggccaacgccaagtaccggccggtgtgggaaccccgcttcctgctcttcgccaag
agcagcgacatcccgaggatcggcctggcgagcgcccgcgccgagggcttcctgaccctg
ccgggccgctcatag
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