Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5899
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Entry
SHJG_5899 CDS
T02063
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03420
Nucleotide excision repair
shy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SHJG_5899
03430 Mismatch repair
SHJG_5899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_5899
Enzymes [BR:
shy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SHJG_5899
DNA repair and recombination proteins [BR:
shy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHJG_5899
MMR (mismatch excision repair)
Other MMR factors
SHJG_5899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEY91166
LinkDB
All DBs
Position
6711783..6714125
Genome browser
AA seq
780 aa
AA seq
DB search
MPPDRDAYYRDGAPRPALDAAALLEGLNENQRAAVAHAGSPLLIVAGAGSGKTRVLTHRI
AYLLAERNVHPGQILAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESK
KLGFTSSFSIYDAADSKRLMALVCRDLELDPKRFPPKSFSAKISNLKNELIDEEDFAAQA
TDGFEKTLAQAYALYQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEY
QDTNHAQYALVRELVGTGEHDEDTPPGEHDIPPAELCVVGDADQSIYAFRGATIRNILQF
EEDYPNATTILLEQNYRSTQTILSAANAVIERNESRRPKNLWTNAGQGARIVGYVADTEH
DEAQFVAEEIDRLVDAGHARAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERK
EVRDVLAYLRVLANPEDSVPLRRILNVPKRGIGERAEAMVDALAQREKISFPQALKRVDE
AYGMAARSTNAVKRFNTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETR
IENLQELAAVALEFEQERGEDEQATLADFLEQVALVADSDQIPDEEDGDGVITLMTLHTA
KGLEFPVVFLTGMEDGVFPHMRALGEIKELEEERRLAYVGITRARERLYLTRSAMRSAWG
QPSYNPPSRFLEEIPPAHVEWKRTGAAAPMASGPASGIAASLSSTRSRSSASGASGFATR
RTSEKPVVALAVGDRVTHDQFGLGTVVAVKGTGANAEATIDFGDAKPKRLLLRYAPVERL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
gtgccaccggaccgggacgcctactaccgcgacggcgccccccgccccgccctcgacgcg
gcggcgctgctggaggggctgaacgagaaccagcgcgccgcggtcgcgcacgcgggctcc
ccgctgctcatcgtcgccggcgccggctccggcaagacccgtgtgctgacccaccgcatc
gcctacctgctcgccgagcggaacgtccacccgggccagatcctcgcgatcaccttcacc
aacaaggccgcgggcgagatgaaggagcgcgtcgagcagctcgtcggcccccgggcgaac
gccatgtgggtgatgaccttccacagcgcgtgtgtgcgcatcctgcggcgcgagagcaag
aagctcggcttcacctcgtcgttctcgatctacgacgccgccgacagcaagcgcctgatg
gccctggtctgccgcgacctggagctcgaccccaagcgcttcccgccgaagtccttcagc
gccaagatcagcaacctgaagaacgagctgatcgacgaggaggacttcgccgcccaggcc
accgacggcttcgagaagaccctggcgcaggcctacgccctgtaccagtcgcggctgcgc
gaggcgaacgcgctggacttcgacgacctgatcatgacgacggtcaacctgctgcgcgcc
ttcccggacgtcgccgagcactaccgccgccgcttccggcacgtcctggtggacgagtac
caggacaccaaccacgcccagtacgcgctcgtgcgggaactcgtcggcaccggcgaacac
gatgaggacaccccgcccggcgaacacgacatcccgcccgccgaactctgcgtcgtgggc
gacgcggaccagtcgatctacgccttccggggtgcgacgatccgcaacatcctccagttc
gaggaggactacccgaacgcgacgacgatcctgctggagcagaactaccgctccacgcag
accatcctgtccgccgccaacgcggtcatcgagcgcaacgagtcccgccgcccgaagaac
ctgtggaccaacgccggtcagggcgcccggatcgtcgggtacgtcgccgacaccgagcac
gacgaggcccagttcgtcgccgaggagatagaccgcctggtcgacgcgggccacgcgcgc
gcgggagacgtcgccgtcttctaccgcaccaacgcccagtcccgtgtgttcgaagagatc
ttcatccgcgtcggcctgccctacaaggtcgtcggcggagtccgcttctacgagcgcaag
gaggtccgggacgtccttgcctacctgcgcgtcctcgccaacccggaggactcggtgccg
ctgcgccgcatcctcaacgtgcccaagcggggcatcggcgagcgcgcggaggcgatggtc
gacgccctcgcccagcgcgagaagatcagtttcccgcaggccctgaagcgggtggacgag
gcgtacggcatggccgcgcgctccaccaacgcggtcaagcggttcaacacgctgatggag
gacctgcggacgatcgtcgagtccggcgccggaccggccaccgtgctggaggccgtcctc
gaacgcaccggttacctggccgagttgcaggcctccaccgacccgcaggacgagacccgg
atcgagaacctccaggagctcgcggccgtggccctggagttcgagcaggagcggggcgag
gacgagcaggcgaccctggccgacttcctggagcaggtcgccctggtcgccgactccgac
cagatcccggacgaggaggacggcgacggcgtcatcacgctgatgaccctgcacaccgcc
aagggtctggagttcccggtcgtgttcctgaccggcatggaggacggcgtcttcccgcac
atgcgcgccctcggcgagatcaaggagctggaggaggagcggcgcctggcgtacgtcggc
atcacgcgcgcgcgggagcggctctacctcacgcggtcggcgatgcgcagcgcctggggc
cagccgtcgtacaacccgccctcccgcttcctggaggagatcccgcccgcccacgtggag
tggaagcggaccggggcggcggcgcccatggcctccgggccggcgtccgggatcgccgcc
tcgctgtcctcgacccgttcccgctcctcggcctcgggcgcgtccgggttcgccacgcgg
cgcacgtcggagaagccggtggtcgcgctggccgtcggggaccgggtcacccacgaccag
ttcgggctcggcacggtcgtcgccgtgaaggggacgggcgcgaacgcggaggcgacgatc
gacttcggcgacgccaagccgaagcggctgctgctgcggtacgcgccggtggagaggctg
taa
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