Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5955
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Entry
SHJG_5955 CDS
T02063
Name
(GenBank) glycine betaine ABC transporter integral membrane protein
KO
K02001
glycine betaine/proline transport system permease protein
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHJG_5955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shy02000
]
SHJG_5955
Transporters [BR:
shy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
SHJG_5955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AEY91222
LinkDB
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Position
6795910..6797781
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AA seq
623 aa
AA seq
DB search
MGKLLLLALLTAVLLPLLGRWGNGSWPHALTVRLDAPLATASDWVMDNRDSHPLFLYFFG
YVSNAVIWAVRAVYLTLLAAGWAGVTAFAALLAWRVAGVRLAAGTAVAFLACGALDMWVP
TMQTLALMVVAVLASVVVGALLGLAAGLSDRLDRALRPVLDTMQVLPAFAYLLPVVLVFG
IGVPAAVLATVVYAAPPMARLTALGLRGADPEVLEAVESLGATRRQRLLTARIPLARKEL
LLGLNQTIMMALSMAVIAAVIGAGGLGDRVYQALASVDVGAALAAGIPIVLLAVVLDRVT
AAAGDGTTRPRTIGWPYALAVTAAVALATRLLGAPDWPGGWTVGIAEPVNRAVDWMTAHL
YSGVPVVGGTADWAGHFTTWVLDPVRDGLQWLPWWAVLLVVAALAWLIGTWRTALTAVLA
MAAIGVLGVWEPSLDTLSQVLAAVAVTLVLGFATGIAAARSDRVERALRPVLDVFQTMPQ
FVYLIPVVALFGVGRAPAVAAAVVYALPAVVRITAQGLRQVDQAALESARSLGATGRQQL
WQVQLPLARRALLLAVNQGVVLVLAVVIIGGLVGGGALGYDVAFGLAQGDLATGLVAGGA
IVCLGLMLDRVTQPTERRAKKGA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaaactcctgctgctcgccctcctcaccgcggtcctcctgccgctcctcggccgc
tggggcaacggctcctggccgcacgcgctgacggtccgcctcgacgcacccctcgccacc
gccagcgactgggtcatggacaaccgggacagccacccgctgttcctgtacttcttcggc
tacgtcagcaacgccgtcatctgggccgtccgggccgtctacctcaccctcctcgccgcc
ggctgggcaggcgtcaccgccttcgccgccctgctcgcctggcgcgtggccggtgtccgg
ctggccgccggcacggccgtcgccttcctcgcctgcggcgccctcgacatgtgggtcccg
accatgcagaccctcgcgctgatggtcgtggcggtcctcgcctccgtcgtcgtcggcgcg
ctcctcggcctggccgccggcctctccgaccgcctggaccgcgccctgcgcccggtcctg
gacaccatgcaggtgctcccggccttcgcctacctcctccccgtcgtcctggtcttcggc
atcggcgtccccgcggccgtcctcgccaccgtcgtctacgccgccccgccgatggcccgc
ctcaccgcgctcggcctgcgcggcgccgaccccgaagtcctggaggccgtggagtcgctc
ggcgcgacccgccgccagcggctgctgacggcccgcatcccgctggcccgcaaggaactc
ctcctcggcctcaaccagacgatcatgatggccctgtccatggccgtgatcgccgccgtc
atcggcgcgggcggcctcggcgaccgcgtctaccaggccctcgcctccgtcgacgtcggc
gcggccctcgcggccggcatccccatcgtgctgctcgcggtggtcctggaccgcgtgacc
gccgccgccggggacggcaccacccgcccccgcacgatcggctggccgtacgccctcgcc
gtcaccgcggccgtcgccctcgccacccgcctcctcggcgcgccggactggcccggcggc
tggaccgtgggcatcgccgaaccggtcaaccgggccgtcgactggatgaccgcccacctg
tactccggcgtcccggtcgtcggcggcaccgccgactgggcgggccacttcaccacctgg
gtcctggaccccgtacgcgacggcctccagtggctgccctggtgggcggtgctgctcgtc
gtcgccgccctggcctggctgatcggcacctggcgcaccgcgctgaccgccgtcctcgcc
atggccgcgatcggtgtcctcggcgtgtgggagccgtcgctcgacaccctctcccaggtg
ctggccgccgtcgccgtcaccctcgtcctgggcttcgcgaccggcatcgccgccgcccgc
agcgaccgcgtcgaacgcgccctgcgcccggtcctggacgtcttccagaccatgccgcag
ttcgtgtacctgatcccggtcgtcgcgctgttcggcgtgggccgcgcgcccgccgtcgcc
gcggccgtcgtctacgcgctgccggccgtcgtccggatcaccgcgcagggcctgcgtcag
gtcgaccaggccgcgctggagtccgcgcgctcgctgggcgcgaccggccgccagcagctg
tggcaggtccagctcccgctggcccggcgcgcgctgctgctcgccgtcaaccagggcgtg
gtactggtcctcgccgtcgtcatcatcggcggcctggtcggcggcggcgccctcggctac
gacgtcgcgttcggcctcgcccagggcgacctggcgaccggtctggtcgccggcggcgcc
atcgtctgcctgggcctgatgctggaccgggtgacccagccgaccgagcggcgcgcgaag
aagggagcctga
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