Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_5978
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Entry
SHJG_5978 CDS
T02063
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00020
Citrate cycle (TCA cycle)
shy00190
Oxidative phosphorylation
shy00650
Butanoate metabolism
shy00720
Other carbon fixation pathways
shy01100
Metabolic pathways
shy01110
Biosynthesis of secondary metabolites
shy01120
Microbial metabolism in diverse environments
shy01200
Carbon metabolism
Module
shy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shy_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SHJG_5978
00650 Butanoate metabolism
SHJG_5978
09102 Energy metabolism
00190 Oxidative phosphorylation
SHJG_5978
00720 Other carbon fixation pathways
SHJG_5978
Enzymes [BR:
shy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SHJG_5978
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AEY91245
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Position
complement(6819641..6821395)
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AA seq
584 aa
AA seq
DB search
MKIHKYDTVIVGAGGAGMRAAIEATKRSRTAVLTKLYPTRSHTGAAQGGMAAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVLDLEKMGLPFNRTPNGTIDQRRFGGHS
RNHGEAPVRRSCYAADRTGHMILQTLYQNCVKEGVEFFNEFYVLDQLITEVDGVKRSAGV
VAYELATGEIHVFQAKAVIYASGGTGKFFKVTSNAHTLTGDGQAAVYRRGLPLEDMEFFQ
FHPTGIWRMGILLTEGARGEGGILRNKDGERFMEKYAPVMKDLASRDVVSRSIYTEIREG
RGCGPEGDHVYLDLTHLPPEQLDAKLPDITEFARTYLGIEPYTDPIPIQPTAHYAMGGIP
TNVEGEVLADNTTVVPGLYAAGEVACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYSAK
ADYVELPEAPESFVVEQIERLRTSTGNERVATLRRELQETMDANVMVFRTEQTIKTAVEK
IAELKERYKNVAIQDKGRRFNTDLLEAIELGNLLDLAEVMAVSALARKESRGGHYREDYP
NRDDVNFMRHTMAYREVGADGSETVRLDYKPVVQTRYQPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccacaagtacgacaccgtcatcgtcggcgccggcggcgcgggcatgcgcgcc
gccatcgaggcgacgaagcgcagccgcaccgcggtcctgaccaagctctaccccacccgc
tcccacacgggcgccgcgcagggcggcatggccgccgcgctggccaacgtggaggaggac
aactgggagtggcacaccttcgacacggtcaagggcggtgactacctggtcgaccaggac
gccgccgagatcctggcgaaggaggccatcgacgccgtcctcgacctggagaagatgggc
ctgccgttcaaccggacgccgaacggcaccatcgaccagcgccgcttcggcggtcacagc
cgcaaccacggcgaggccccggtccgccggtcctgctacgccgcggaccgcaccggccac
atgatcctccagacgctgtaccagaactgcgtcaaggagggcgtggagttcttcaacgag
ttctacgtcctggaccagctgatcaccgaggtcgacggcgtcaagaggtcggccggtgtg
gtggcgtacgagctcgccaccggcgagatccacgtcttccaggcgaaggccgtcatctac
gcctccggcggcaccggcaagttcttcaaggtgacgtcgaacgcccacaccctgaccggt
gacggtcaggcggcggtctaccggcgcggcctgccgctggaggacatggagttcttccag
ttccacccgaccggcatctggcgcatgggcatcctgctcaccgagggcgcccgcggcgag
ggcggcatcctgcgcaacaaggacggcgagcgcttcatggagaagtacgctcccgtcatg
aaggacctggcgtcccgtgacgtcgtgtcccgctccatctacacggagatccgcgagggc
cgcggctgcggtcccgagggcgaccacgtctacctggacctgacccacctgccgccggag
cagctggacgccaagctcccggacatcaccgagttcgcgcggacctacctcggcatcgag
ccgtacacggacccgatcccgatccagccgaccgcgcactacgcgatgggcggcatcccg
acgaacgtcgagggtgaggtcctggcggacaacaccaccgtcgtcccgggtctgtacgcg
gccggcgaggtcgcctgcgtgtccgtgcacggcgccaaccgcctcggcaccaactcgctg
ctggacatcaacgtcttcggccgccgcgcgggcatcgccgccgccgagtactcggcgaag
gccgactacgtcgagctgccggaggccccggagtccttcgtcgtcgagcagatcgagcgg
ctgcgcacctccaccggcaacgagcgggtggcgacgctgcgccgcgagctccaggagacc
atggacgccaacgtcatggtgttccgcaccgagcagacgatcaagacggccgtcgagaag
atcgccgagctcaaggagcgctacaagaacgtggcgatccaggacaagggccggcgtttc
aacacggacctgctggaggcgatcgagctgggcaacctgctcgacctggccgaggtcatg
gcggtgtcggccctcgcccgcaaggagtcccgcggtggtcactaccgcgaggactacccg
aaccgcgacgacgtcaacttcatgcgccacaccatggcgtaccgcgaggtcggcgccgac
ggctcggaaaccgtccgtctcgactacaagccggtcgtccagacccgctaccagccgatg
gagcgtaagtactga
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