Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_6203
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Entry
SHJG_6203 CDS
T02063
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00020
Citrate cycle (TCA cycle)
shy00190
Oxidative phosphorylation
shy00650
Butanoate metabolism
shy00720
Other carbon fixation pathways
shy01100
Metabolic pathways
shy01110
Biosynthesis of secondary metabolites
shy01120
Microbial metabolism in diverse environments
shy01200
Carbon metabolism
Module
shy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shy_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SHJG_6203
00650 Butanoate metabolism
SHJG_6203
09102 Energy metabolism
00190 Oxidative phosphorylation
SHJG_6203
00720 Other carbon fixation pathways
SHJG_6203
Enzymes [BR:
shy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SHJG_6203
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
FAD_oxidored
GIDA
Thi4
FAD_binding_3
Lycopene_cycl
NAD_binding_8
Pyr_redox_3
NAD_binding_7
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AEY91470
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Position
complement(7058326..7060281)
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AA seq
651 aa
AA seq
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MSVVDRQEWDVVVVGAGGAGLRAAIEARERGARTAVICKSLFGKAHTVMAEGGIAAAMAN
ANEHDTWQVHFRDTMRGGKFLNQWRMAELHAREAPDRVWELETWGALFDRTKDGRIAQRN
FGGHEYPRLAHVGDRTGLELIRTLQQKIVALQQEDFQETGDHESRLKVFQECTVTRILKD
TPSDGGSAGGRVSGVFAYDRETGRFFVLQAPAVVLATGGIGKSFKVTSNSWEYTGDGHAL
ALLAGAPLLNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYIPEVF
KEKYAESEEEADRWYEDPDHNRRPPELLPRDEVARAINAEVKAGRGSPHGGVFLDVSTRM
PAEVVRRRLPSMYHQFKELADVDITAEAMEVGPTCHYVMGGIAVDSDTAAARGVPGLYAA
GEVAGGMHGSNRLGGNSLSDLLVFGRRAGRHAAEYARALAHRRPSVDDAQVGAASAEALR
PFSVGAEGEAGPPENPYTLHQELQQAMNDLVGIIRREGEMEQALHKLAELRVRARRAGVE
GHRQFNPGWHLALDLRNMLLVSECVARAALERTESRGGHTREDHPRMERAWRNVNLLCTL
ADPAGGLAATDPARGQIRLTRETTEPIRPDLLALFEKEELVKYLAEEELYE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtcgaccggcaggagtgggacgtcgtggtggtcggcgccgggggcgcgggc
ctccgcgcggcgatcgaggcgcgcgagcggggcgcccgtacggcggtgatctgcaagtcg
ctgttcggcaaggcgcacacggtgatggccgagggcggcatcgcggcggcgatggccaac
gccaacgagcacgacacctggcaggtccacttccgcgacaccatgcgcggcggcaagttc
ctcaaccagtggcggatggccgaactgcacgcgcgggaggccccggaccgggtgtgggag
ctggagacctggggcgcgctgttcgaccgtacgaaggacggccgcatcgcgcagcggaac
ttcggcggacacgagtacccgcgcctggcccacgtgggcgaccgtacgggcctggagctg
atccgcacgctccagcagaagatcgtcgcgctccagcaggaggacttccaggagaccggg
gaccacgagtcccggctgaaggtcttccaggagtgcacggtcacccggatcctcaaggac
acgccgtccgacggcggctccgccgggggccgcgtgagcggtgtcttcgcctacgaccgc
gagaccggccgcttcttcgtcctccaggcgccggccgtggtcctcgcgaccggcggcatc
ggcaagtccttcaaggtcacgtccaactcgtgggagtacacgggcgacggccacgcgctg
gcgctgctggccggcgccccgctgctcaacatggagttcgtgcagttccacccgacgggc
atggtctggccgccgtcggtgaagggcatcctcgtcaccgagtcggtgcgcggggacggc
ggggtgctgcggaactccgagggcaagcggttcatgttcgactacatcccggaggtcttc
aaggagaagtacgccgagtcggaggaggaggccgaccggtggtacgaggaccccgaccac
aaccgccggccgcccgaactcctcccccgcgacgaggtggcccgcgcgatcaacgccgag
gtgaaggcgggccggggctccccgcacggcggggtcttcctggacgtgtcgacccggatg
cccgccgaggtggtccggcgccggctgccgtccatgtaccaccagttcaaggagctggcg
gacgtcgacatcaccgcggaggccatggaggtcgggccgacctgccactacgtgatgggc
ggcatcgccgtcgactccgacacggcggcggcgcgcggggtgcccgggctgtacgcggcc
ggtgaggtggccggcggcatgcacggctccaaccggctcggcggcaactccctgtccgac
ctgctggtgttcgggcgccgggccggccggcacgcggcggagtacgcgcgggcgctggcc
caccggcgcccgtccgtggacgacgcccaggtcggcgcggcgtcggcggaggcgctgcgg
ccgttctccgtcggggcggagggcgaggcgggcccgccggagaacccgtacaccctgcac
caggaactccagcaggcgatgaacgacctggtcggcatcatccgccgcgagggcgagatg
gagcaggccctgcacaagctggccgagctgcgcgtgcgggcccggcgggccggcgtcgag
ggccaccgccagttcaaccccggctggcacctcgccctggacctcaggaacatgctgctg
gtcagcgagtgcgtggcccgggccgcgctggagcgcaccgagtcgcgcggcgggcacacc
cgcgaggaccatccccggatggagcgggcctggcgcaacgtgaacctgctgtgcaccctc
gccgaccccgccggcggcctcgcggcgaccgacccggcccgcggccagatccgcctcacc
cgcgagaccaccgaacccatccgcccggacctgctcgccctcttcgagaaggaggagctg
gtcaagtacctcgccgaagaggagctgtacgagtga
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