Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_6890
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Entry
SHJG_6890 CDS
T02063
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00300
Lysine biosynthesis
shy00470
D-Amino acid metabolism
shy01100
Metabolic pathways
shy01110
Biosynthesis of secondary metabolites
shy01120
Microbial metabolism in diverse environments
shy01230
Biosynthesis of amino acids
Module
shy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHJG_6890
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHJG_6890
Enzymes [BR:
shy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SHJG_6890
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AEY92157
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Position
7842684..7843553
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AA seq
289 aa
AA seq
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MSTRIAFLKGHGTENDFVIVPDPENALDLSPAAVAALCDRRAGIGGDGVLHVVRSAAHPE
ARGMAAEAEWFMDYRNGDGSVAEMCGNGVRVFARYLQHAGHAAEGDLAIATRAGVKTVHI
AKDGDITVGMGRARLPEGDVTVTVGEHSWPARNVNMGNPHAVAFVADLAHAGDLYTAPPV
SPAATYPDGVNVEFVVDRGPRHVAMRVHERGSGETRSCGTGACAVAVATARRDGTDPAVT
GTPATYTVDVPGGRLVITERPDGEIEMTGPAVIVAEGEIDAEWLAHAFG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacggatcgccttcctcaagggtcacggcaccgagaacgacttcgtgatcgtc
ccggaccccgagaacgccctcgacctgtccccggccgccgtcgccgccctgtgcgaccgc
cgggcgggcatcggaggcgacggcgtgctgcacgtcgtacggtccgcggctcacccggag
gcgcgggggatggccgccgaggccgagtggttcatggactaccgcaacggcgacggctcg
gtcgccgagatgtgcggcaacggcgtccgtgtgttcgcgcgctacctccagcacgccgga
cacgcggccgaaggcgacctcgcgatcgccacgcgcgcgggcgtgaagaccgtccacatc
gcgaaggacggcgacatcaccgtcggcatgggccgcgcccgcctccccgagggagacgtc
acggtcaccgtcggcgagcacagctggcccgcgcgcaacgtgaacatgggcaacccgcac
gcggtggccttcgtggccgacctggcgcacgccggcgacctgtacaccgcgccgccggtc
agcccggcggccacgtacccggacggggtgaacgtcgagttcgtggtcgaccgcggcccc
cgccacgtcgccatgcgcgtgcacgagcgcggctccggcgagacccgctcgtgcggtacg
ggcgcctgcgccgtcgccgtggccaccgcccggcgggacggcaccgacccggccgtcacc
ggcaccccggcgacctacaccgtcgacgtgcccgggggccgcctcgtcatcaccgagcga
ccggacggcgagatcgagatgaccggccccgccgtgatcgtcgccgagggcgagatcgac
gccgagtggctggctcacgcgttcggctga
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