Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_7222
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Entry
SHJG_7222 CDS
T02063
Name
(GenBank) ADA-like regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHJG_7222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shy03000
]
SHJG_7222
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_7222
Enzymes [BR:
shy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SHJG_7222
Transcription factors [BR:
shy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SHJG_7222
DNA repair and recombination proteins [BR:
shy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHJG_7222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF7437
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AEY92489
LinkDB
All DBs
Position
8243039..8244436
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AA seq
465 aa
AA seq
DB search
MKDEDSRYEAVRSRDGRFDGVFFFAVETTGIYCRPSCPAVTPKRRNVRFFATAAAAQGSG
FRACRRCRPDAVPGSAEWNVRADVVGRAMRLIADGVVDREGVAGLAARLGYSARQVQRQL
TAELGAGPVALARAQRAHTARVLLRTTDLPVTEIAFASGFASVRQFNDTIRELYAATPTE
VRAAAPRNRATRRAAPGAGIPLRLAHRGPYQSAAVFDQLAREAVPGVEEVTGAPGARTYR
RTLRLPYGTGLAAVDERARTPRAGTGTRPGGWLDARLHLTDPRDLTTAVQRLRRLFDLDA
DPYAVDERLGADPRLAPLVAARPGLRSPGAVDPLEPAVRALAGIRRAGELVRRYGKVLDA
PHGGLTHLFPEPAVLAEAEPGGPLGALAAALADGTVRLDPGADRHDAEEALLAVPGMDPA
TVATLRVRALGDPDVAPPGADVPDTWRPWRSYAVRHLLVAGEPVR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggacgaagacagcaggtacgaggcggtgcgcagccgggacgggcggttcgacggg
gtgttcttcttcgccgtcgagaccaccggcatctactgccggcccagctgcccggccgtg
acgccgaaacggcgcaacgtacggttcttcgcgacggccgccgccgcgcagggctccgga
ttccgggcctgccggcggtgccggccggacgccgtgccgggctcggcggagtggaacgtc
cgcgcggacgtcgtcggccgggccatgcgcctgatcgccgacggcgtcgtggaccgcgaa
ggcgtcgccgggctcgccgcgcggctcggctacagcgcccggcaggtccagcggcagctc
accgccgagctgggcgccgggcccgtggcgctcgcccgggcccagcgggcgcacaccgcg
cgggtgctgctgcggaccaccgacctgccggtcaccgagatcgcgttcgcgtccgggttc
gccagcgtgcggcagttcaacgacaccatccgggagctgtacgccgcgacccccaccgag
gtgcgggccgccgccccccggaaccgcgccacccgccgggccgcgcccggcgccggcatc
ccgctccggctcgcccaccgcggcccctaccagtccgccgccgtcttcgaccagctcgcg
cgggaggccgtaccgggcgtcgaggaggtgaccggcgcccccggcgcccgcacctaccgg
cgcaccctgcgactgccgtacggcaccggcctcgccgccgtcgacgaacgcgcccgcacc
ccgcgggccggcaccggcacccgcccgggcggctggctcgacgcccggctgcacctcacc
gacccccgggacctcaccaccgccgtgcagcggctgcgccggctgttcgacctggacgcc
gacccgtacgccgtcgacgaacggctcggcgccgacccccggctcgccccgctggtcgcc
gcccggcccggactgcgctcgcccggcgccgtggacccgctggagcccgccgtacgcgcc
ctggccggcatccgccgcgccggggaactggtgcgccggtacggcaaggtgctcgacgcg
ccccacggcggtctgacccacctcttcccggagcccgccgtcctcgccgaggccgagccc
ggcggcccgctgggcgcgctcgccgccgccctcgccgacggcaccgtacggctggacccg
ggcgccgaccggcacgacgccgaggaggccctgctcgccgtgcccggcatggacccggcc
accgtcgccaccctccgcgtccgcgccctcggcgatcccgacgtcgccccgcccggcgcc
gacgtccccgacacctggcggccctggcggtcgtacgccgtccggcatctgctggtggcg
ggggagccggtccggtga
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