Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_7388
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Entry
SHJG_7388 CDS
T02063
Name
(GenBank) exonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHJG_7388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_7388
Enzymes [BR:
shy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SHJG_7388
DNA repair and recombination proteins [BR:
shy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SHJG_7388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEY92655
LinkDB
All DBs
Position
8418096..8418875
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AA seq
259 aa
AA seq
DB search
MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEEQFPFDQLRELGYEAAVHATG
RWNGVAVLSRVGIEDVVKGLPGDPGYDGVTEPRALSATCGPVRVWSVYVPNGREVGHPHY
AYKLQWFEALKAAVYGDAQGSRPFAVLGDYNVAPTDDDVYDPAAFEGSTHITPAERAALA
ALREAGLDDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNQPFAQAVKDAYVDRE
ERKGKGASDHAPVVVDLDV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgctacctggaacgtgaactcgatcaccgcccgccttccccggctgttggcc
tggctggagagcagcggcaccgacgtgctctgcctccaggaggccaaggtcgccgaggag
cagttcccgttcgaccagctccgcgagctgggctacgaggccgcggtccacgcgaccggc
cggtggaacggcgtggcggtgctctcccgcgtcggcatcgaggacgtggtcaagggcctg
cccggcgacccgggctacgacggcgtgaccgagccgcgcgccctctcggcgacctgcggc
ccggtccgcgtctggtcggtgtacgtgccgaacggccgcgaggtcggccacccgcactac
gcgtacaagctccagtggttcgaggcgctgaaggcggccgtgtacggcgacgcgcagggc
agccgcccgttcgcggtgctgggcgactacaacgtcgcgccgacggacgacgacgtctac
gacccggccgccttcgagggctccacccacatcaccccggccgagcgcgctgcgctggcc
gccctgcgcgaggcgggcctggacgacgtcgtgccgcgcccgctgaagtacgaccacccg
ttcacctactgggactaccgccagctctgcttcccgaagaaccgcggcatgcgcatcgac
ctggtgtacggcaaccagccgttcgcccaggccgtcaaggacgcctacgtcgaccgcgag
gagcgcaagggcaagggcgcctccgaccacgcgccggtggtggtcgacctggacgtgtga
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