Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_8063
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Entry
SHJG_8063 CDS
T02063
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shy03032
]
SHJG_8063
03400 DNA repair and recombination proteins [BR:
shy03400
]
SHJG_8063
Enzymes [BR:
shy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SHJG_8063
DNA replication proteins [BR:
shy03032
]
Prokaryotic type
DNA Topoisomerases
SHJG_8063
DNA repair and recombination proteins [BR:
shy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SHJG_8063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AEY93329
LinkDB
All DBs
Position
9214826..9215851
Genome browser
AA seq
341 aa
AA seq
DB search
MRLRTSSPDGPGYTRVRRGRGFRYVDGAGEPLTDPGQLARVRALTIPPAWRDVWICPWPN
GHLQAVGTDDAGRRQYLYHERFRAEQDKAKHEHVRQVARALPELRAKVALDLAGRGLSRE
RVTACAVRLLDLGFFRIGSDRHTRASETYGLTTMLREHVGCARGEISFGYPAKGGVEMVR
ALVDEQVHAVARSLLRRPRGGDRFLAYWDRGAWHDLRGDDLNEALRRLSGTDVTAKDFRT
WHATVLAAVAVSVTARGARATEAARRRQIARAVREVSHYLGNTPAVCRTSYIDPKVFELF
EQGVTVAPVLTRLGEHGEFGRPATQGAVEAAVLDLLDGSGG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcgcaccagttcgcccgacggccccggctacacgcgcgtccgccgcggccgg
ggcttccgctacgtcgacggcgccggcgagcccctgaccgaccccgggcagctcgcccgc
gtccgcgccctgaccatcccgcccgcctggcgcgacgtgtggatctgtccctggcccaac
ggccacctccaggccgtcggcaccgacgacgccggacgccggcagtacctgtaccacgag
cggttccgggccgagcaggacaaggccaagcacgagcacgtacggcaggtggcgcgggcc
ctgcccgagttgcgcgccaaggtggcgctggacctcgccgggcgggggctgagccgggag
agggtcaccgcctgcgcggtccgcctgctcgacctcggcttcttccgcatcggcagcgac
cggcacacccgcgccagcgagacctacggcctgacgaccatgctccgcgagcacgtcggc
tgcgcacgcggcgagatcagcttcggctacccggccaagggcggcgtcgagatggtccgc
gccctcgtcgacgagcaggtgcacgcggtcgcccggtccctgctgcgccgcccgcgcggc
ggcgaccgcttcctcgcctactgggaccgcggtgcctggcacgacctgcgcggcgacgac
ctcaacgaggccctgcgccggctgtccggcaccgacgtcaccgccaaggacttccgcacc
tggcacgccaccgtgctggccgccgtggcggtctccgtgaccgcgcggggcgcccgggcg
accgaggccgcccggcgccggcagatcgcccgggccgtccgcgaggtcagccactacctg
ggcaacacgcccgcggtgtgccggacgtcgtacatcgacccgaaggtcttcgagctgttc
gagcagggcgtcaccgtcgcccccgtgctcacccggctgggcgaacacggggagttcggg
cgtccggccacgcagggagccgtcgaggcggccgtactcgatctcctcgacggctccggc
ggatga
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