Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_p1130
Help
Entry
SHJG_p1130 CDS
T02063
Name
(GenBank) YD repeat-containing protein
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
AEY94261
LinkDB
All DBs
Position
pSHJG1:115350..121508
Genome browser
AA seq
2052 aa
AA seq
DB search
MAVTVLQGAEGVVSTASASAAQAQTAGKKKPYATSAADVPSARVLARLSGKRVEALSERT
ETSTTWVNANGSLTTELSAGPVRFQDKAGHWRGVDLELVGKPDGSVGPKAHPRGLAFAKP
GGKRLTALSQGKTAGARDLVTLGEGDQQITLQWKGGLPKPKLDGNRATYGNAVPGADVIL
EATRTGFEQYVRINERPGEKYSYTLPLKAKGLRVRQLKDGSVQFTDKKSKKRAVMPAPVM
WDASVDKRSGEHTHRAKVGLKVVHRKGGVDLVITPDAKFLASPKTQYPVTVDPSTSSLSN
VFDTYVQQGETVDWSTDTELDFGNPGTKNADGTPRTAESFISWNTTPVQDALVLDAKLSL
WNFHSGNEDCKLYPWEVWASGAASTSSRWTNRPTMTAKKATSTETRGNAGCTTQPDGWIN
ADVTTLVQEWASAKATRGHMGLRASDESAVSQWKRVNSANAASNPPKLVVNYNYRPRTGT
KQEAGPPYFSYSGSYVVNTTTPTLRDTFVDADGDKVDGTFQIYDNATNTQVGNVLVSKFV
PSGQVASVTVPAGLLSDGKTYKFRTNPYDGTHYNTGWSAWKTFTVDTKAPSAPVKITSTD
YPSDKWVKGAGQAGVFTVTPPASDHNWLEWSLDGVTWTKVSTGGSSADKNISITPPKNGT
HTLQVRSVDKADNKSEAIEYTFHAGPGGFIEPDEGERTARRLPLVAEAAAGTYDNVSFSW
RRSEADAWVKIPAGDVTSDGQPVTAWPVPLANGKNAKLVWNATDTVNPDGSVQIKADFTG
PNSASGSTEPLTVVVDRNADGAATDEVGPGSVNLLTGDYSLSATDASAFDLTASRTASSR
VPDKGAKQEGQAAIFGKEWVAGTAAELTESDYNSLRKISDTAVAVVDSEGEETYFTANSA
KDGWIPEPGSEDLTLKGSVTGSFTLTDTEGTVTEFTKPASDATTWQVSSTLLDGLSNTTT
TVVSETVTVDGKKLARPKRVIAPTSAASAASCTSDPSTKGCRALEFVYASSTTATAGSFG
DFADQVKEIRLWSTEPGASAATSKAVQTYAYDTAGRLRQAWNPQISPALKTEYDYDSSGR
VTQFTPPGELPWNFTYGKAGNAATAGEGMLLKASRAGLQQGTPDIQQGTATTSVVYDVPL
TGTAAPYQMGTSDVKAWGQTDAPTDATAVLPADAIPASNSGGSLNAGDYTRADVHYLGVS
GREVNSATPGGHISTTEYDRFGNTVRELSAANRAVALGISADDKAAQADLGIAQLAASDR
ANLLDTRSVYNDTGTRKLEEYGPLRRIDLTADLKQGTTVLVPAGTSVTARSWTVNDYDEG
RPTDGTAKVKDQVTKTTVGAQVREQPGVQGETRITQTVYDWAKGLPTKTIKDPGGAAITE
TTEYDAQGRVTKQYLPGASGTDAGTRVTTYWSATGTGACAGRPEWADLVCSISAGGAITG
GGSNPTQLPTTTTEYDWWGNQAKVTDTANGSTRTTTTSYDNAGRQSKVTITGGVGQAVPE
ATTEYDPATGKAIKTVSPTGGTITKAYDKLGRQISYTDADNGTTTTEYDLLDRPVKVSDS
VPSTVTYTYDTTTEPRGLVTSTTDSVAGTFKATYDADGSVATEKLPGGYTLAQTEDTTGS
AAQRTYTRDSDGTIVYSDTVTESVHGQVTSHAGFSSQNYGYDTIGRLTTVEDTYQTTCTR
RTYTFDNHTNRKSLTTNAGTPGTDCPTTGGTTTTYTYDSADRLVDTGYTYDAFGRTTAVP
GQGTIAYYANDLAYQQTANGQRQTWQLDAALRLRSWKVETGSGSTWTQTASKLNHYDSDS
DNPRWIVEDTTGGALTRTVESASGDLAATTSKTGDTVLQLTTIHGDVALQLPLDTTKAPT
ALDTDEYGNPRTGQAATRYGWLGGKQRSSETLTGLTLMGIRLYNPTTGRFLSTDPVYGGN
ANAYEYVTADPIDKFDLDGRRWCWRWCRTADRWGRNPNWRHYYYGANIALSVVSFRRIKG
LKKFRARSCWTRWRGFAACGGHAFGVYDLVYSVHKYRQNYSYLRAYNTALTYQARQRICR
RYTGYRGRHQCA
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcacggtgctgcagggagccgagggcgtcgtttctacggcgtcggcgtctgcg
gcccaggctcagacagcggggaagaagaagccgtacgccacatcggcggcggacgtaccc
tcggcgcgtgttctggcgcgtctgtcgggcaagcgggtggaggctctgtccgagcggacc
gagacgtcgacgacctgggtcaacgccaatggcagtctgactacggagctgtcggcaggg
cctgtccgcttccaggacaaggccgggcactggcgtggtgtcgatctggagctggttggc
aagccggatggatcggtcgggccgaaggcacaccctcggggactggctttcgccaagccg
ggtggtaagcggctgaccgcgctgtcgcagggtaagacggccggtgcacgggacctggtg
accctgggtgagggtgatcagcagatcaccctgcagtggaaaggtggtctgcccaagccg
aaactggatggcaaccgcgccacctacggcaacgccgtccccggcgccgacgtgatcctt
gaggccaccaggacgggttttgagcagtacgtccggatcaatgagcgtcccggcgagaag
tactcctacacgctgccgctgaaggccaagggcttgagggttcggcagcttaaagacgga
agcgtccagttcaccgacaagaagagcaagaagcgggccgtgatgccggccccggtgatg
tgggacgcgtcggtcgacaagaggtccggtgagcatacgcatcgggcgaaggtcggcttg
aaggtggtgcaccgcaagggtggcgtcgacctggtgatcacgccggacgccaagttcctg
gcgtcacctaagacgcagtacccggtcaccgttgacccgtccacttcctcgctgtcgaac
gtcttcgacacctacgtgcagcagggcgagacggtcgactggtccaccgacaccgagctg
gacttcggtaacccgggtacgaagaacgccgacgggacgccgcggacggcagagtcgttt
atctcgtggaacaccacgccggtccaggacgccctggtcctggacgcgaagctgtcactg
tggaacttccactcgggcaacgaggactgcaagctctacccgtgggaggtgtgggcctca
ggcgctgcgtccacctccagccggtggacgaaccgtccgacgatgaccgcgaagaaggcc
acctcgaccgagacccgcggaaacgctgggtgcaccacgcagccggacggctggatcaat
gccgacgtgacgaccctcgttcaggagtgggcgtcggccaaggccacccgcggccacatg
ggtctgcgtgcctcggacgagtcggctgtctcccagtggaagcgggtcaactcggccaac
gccgcctccaacccgccgaagctggtagtgaactacaactaccggccgcgcacgggtacc
aagcaggaagctggtccgccgtacttctcctacagcggttcctacgtcgtcaacaccacg
acaccgacgcttcgagacaccttcgtcgacgccgacggtgacaaggtcgacggcaccttc
cagatctacgacaacgccaccaacacgcaggtcggcaacgtcctggtgtcaaagttcgtg
ccgtcagggcaggtggcctcggtgacggtaccggccgggctgctgagcgacggcaagaca
tacaagttccgtaccaacccctacgacgggacgcactacaacaccggctggtcggcgtgg
aagacgttcaccgtcgacaccaaggcgccctccgcccccgtgaagatcacatcgaccgac
tacccgtcggacaagtgggtcaagggcgccggacaggcgggggtcttcacggtcaccccg
ccggcctccgaccacaactggctggagtggtcactggacggcgtgacctggacgaaggtt
tccactggcgggtccagcgcggacaagaacatcagcatcaccccgcccaagaacggcacc
cacaccctgcaggtgcggtccgtggacaaggcggacaacaagtccgaggcgatcgagtac
accttccacgccggcccaggcgggttcatcgagccggacgagggcgagcgcaccgcgcgt
cggctgccgctggtggccgaggctgcggccggcacgtacgacaacgtctccttctcctgg
cggcgttcggaggcggacgcctgggtgaagatccctgcaggggatgtcaccagcgacggt
cagccggtcaccgcatggccggtgccgcttgcgaacggtaagaacgccaagctcgtctgg
aatgccaccgacaccgtcaatcccgacgggtcggtgcagatcaaggccgacttcaccggg
ccgaacagtgcctcgggcagcaccgagccgctgaccgtggtggtcgaccgaaacgccgat
ggcgcggccactgacgaggtcggcccaggcagcgtgaacctgctgaccggcgactacagc
ctgtcggccaccgatgcctcggcgttcgatctgacggcctcccggaccgcttcctcacgg
gtgcccgacaagggcgccaagcaggagggccaagccgcgatcttcggcaaggaatgggtc
gccggtaccgcagcggagctgacggagtccgactacaacagcctgcgcaagatctccgac
accgcagtggcagtggtcgactccgagggcgaggagacctacttcaccgccaactctgca
aaggatggctggattccggaaccgggttcggaggacctgaccctcaagggcagcgtcacg
ggcagcttcacgctgaccgacaccgagggcacggtcaccgagttcaccaagccggcctcc
gacgccaccacctggcaggtctccagtaccctgctggacgggctgagcaacaccaccacc
accgtggtctccgagacggtgaccgtggacggcaagaagctggcccgccccaagcgggtc
atcgcgccgacttcggcggcgtccgcagcatcgtgcacctcggatccgtcgaccaagggc
tgccgggcactggagttcgtgtacgcatcgtcgaccacggctacagccggctcgttcggt
gacttcgcggaccaggtcaaggagatccgcctgtggtccaccgaacctggtgcgtccgcg
gccacgtcgaaggccgtgcagacctatgcctacgacactgctggcaggctgcggcaggca
tggaacccccagatcagtccggcgttgaagacggaatacgactacgactccagtggtcgg
gtcacccagttcaccccgcccggtgaactgccctggaacttcacctacggcaaggcgggc
aacgccgccaccgccggggagggcatgctgctgaaggcctcgcgggccggactgcagcag
ggcaccccggacatccagcagggcaccgcgaccaccagcgtcgtctacgacgttccgctg
accggcacagccgccccgtaccagatgggcacctcggacgtgaaggcatggggccagacg
gacgcccccacggacgccaccgcggtccttcccgccgatgccatccccgcctccaactcc
ggtggctcccttaacgccggtgactacacgcgggccgatgttcactacctgggcgtctca
ggccgtgaggtcaactccgccactccgggcgggcacatctccaccaccgagtacgaccgt
ttcggcaacacggtgcgggagctgtccgccgccaaccgggctgtcgccctgggcataagc
gccgatgacaaggccgcccaggccgacctcggcatcgcccagctcgccgcctccgaccgg
gccaacctgctcgacacccgctcggtctacaacgacaccggcacccgaaagctggaggaa
tacgggcccctgcggcgtatcgacctgaccgccgatctcaagcagggcaccaccgtcctg
gtccccgccggcacgtcggtcaccgcccgcagctggacggtcaacgactacgacgaagga
cgccccaccgacggcaccgccaaggtcaaggaccaggtcaccaagaccacggtcggcgct
caggtccgtgagcagcccggcgtgcagggcgagacccgcatcacccagaccgtctacgac
tgggccaagggccttcccaccaagacgatcaaggacccgggcggggcggccatcaccgaa
accaccgagtacgacgcccagggccgcgtcaccaagcagtacctgcccggcgcgagcggc
actgacgccggcacccgcgtgacgacctactggtccgccaccggcaccggcgcctgcgcc
ggccgtcccgagtgggccgacctggtgtgctccatctccgcgggcggtgcgattaccggc
ggcggttccaaccccacccagttgcctaccaccaccaccgagtacgactggtggggcaac
caggccaaggtgacggacaccgccaacggctccacccgcaccaccaccacgtcctacgac
aacgcaggacgccagagcaaggtcaccatcaccggtggcgtgggccaggccgtgcccgag
gccactaccgaatacgacccggcgaccggcaaggcgatcaagacggtctcgcccaccggc
ggcaccatcaccaaggcctacgacaagctgggccgccagatctcctacaccgacgccgac
aacggaactaccaccaccgagtacgacctgctggaccggccggtcaaggtcagcgacagc
gtgccctcgaccgtcacttacacctacgacacgaccaccgaaccccgcggcctggtcacc
agcaccaccgactcggtggccggcaccttcaaggccacctacgacgccgacggatcggtc
gccaccgaaaagctgcccggcggctacaccctcgcccagaccgaggacaccaccggatcc
gcagcccagcgcacctacacccgcgacagcgacggaaccatcgtctactccgacaccgtc
accgaatccgtccacggccaggtcaccagccacgccggcttctccagccagaactacggc
tacgacaccatcggacggctcaccacggtcgaggacacctaccagacgacctgcacccgc
cgcacctacaccttcgacaaccacaccaaccgcaagtccctgaccaccaacgccggcacc
cctggcaccgactgccccaccaccggaggcaccaccaccacctacacctacgacagcgcc
gaccgcctcgtcgacaccggctacacctacgacgcgttcggccgcaccaccgccgtcccc
ggccagggcaccatcgcctactacgccaacgacctcgcctaccagcagaccgcgaacggc
cagcgccagacctggcagctcgacgccgccctgcgcctgcgctcctggaaggtcgaaacc
ggcagcggcagcacctggacccagaccgcatccaagctcaaccactacgacagcgacagc
gacaacccccgctggatcgtcgaagacaccaccggcggagccctcacccgcaccgtcgaa
tccgcctccggcgacctcgccgccaccaccagcaaaaccggcgacaccgtcctgcaactg
accaccatccacggcgacgtcgccctccagctcccgctggacaccaccaaggcacccacc
gccctggacaccgacgaatacggcaacccccgcaccggccaggcagccacccgttacggc
tggctcggcggcaagcagcgctccagcgaaaccctcacaggcctcaccctcatgggcatc
cgcctgtacaaccccaccaccggacgcttcctgtccaccgaccccgtctacggcggcaac
gccaacgcctacgaatacgtcaccgcagacccaatcgataagttcgacctcgacggccgc
cgctggtgctggcgttggtgcaggaccgctgaccgctggggtagaaacccgaactggcgg
cactactactacggcgccaacatcgcgctgtccgtagtttctttccgtcgaatcaagggt
cttaagaaattccgtgcccgcagttgctggactcgctggagaggctttgctgcatgtggc
ggccacgccttcggcgtttacgacctggtctactcggtgcacaagtacagacagaactat
tcgtacttgagggcgtacaacacagccctcacctatcaggcgcggcaacgcatctgccgg
cgctacaccgggtaccgagggcgtcaccagtgcgcttga
DBGET
integrated database retrieval system
