Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_p224
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Entry
SHJG_p224 CDS
T02063
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00270
Cysteine and methionine metabolism
shy01100
Metabolic pathways
Module
shy_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SHJG_p224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shy03000
]
SHJG_p224
03032 DNA replication proteins [BR:
shy03032
]
SHJG_p224
03036 Chromosome and associated proteins [BR:
shy03036
]
SHJG_p224
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
shy02048
]
SHJG_p224
Enzymes [BR:
shy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SHJG_p224
Transcription factors [BR:
shy03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SHJG_p224
DNA replication proteins [BR:
shy03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SHJG_p224
Chromosome and associated proteins [BR:
shy03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SHJG_p224
Prokaryotic defense system [BR:
shy02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SHJG_p224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
AlkZ-rel
Motif
Other DBs
NCBI-ProteinID:
AEY94339
LinkDB
All DBs
Position
pSHJG2:complement(23164..24879)
Genome browser
AA seq
571 aa
AA seq
DB search
MMARTSSRKTRTATHRPAVRRRRFRHDESIAVDLFSGFGGLTKGIEDAGFTTIMAANHNA
YKVEVHEANHPDAEHWIADLVDPEASDYHSARDLPAADLLAAGVSCVNHSLANTIKAYEQ
GLTLFELEDPDYEARVTRSERDRATANCVLQYAAKHHPRLILVECTTQLTSWGPALPGRP
KVGDGSTYRWWLKQFDLLGYRHKVLYLNSQFFGVPQSRDRGYWVFVDKSLPMPDLEHRPV
SHCGRCDKDVEAVWTWKTGIPATGTVMYGKQYEYRCPSCRRPVVPPMTPSLAALDLSDLG
TRIGDKPVKTFRDGFVGPLARSSMARAERCRRRFADFPAILMPAKGVHGSERLLLQPMAT
QTSQQETAILSTGSVVQPLWGRDAADRPAMALAVDNFQGAARGAADPLPTQVGSETLAVL
SSGVIPYRKNTLPTLHSEAMPTFTSEQIPAVLTAAGWYKQHGPTGNETAPHPVTDPLGTL
TSRDTTALLMAQWQATLAELPLEDCFYRMMAAHEIGRGCGFDVDFNDYRGTFTVWGSARN
QVDGFGNAVSPQVGTWIGSRLRAVLHRAEAA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgatggcccgaacgtccagcaggaagacccgcaccgccacccaccggccggccgtcagg
cgccgacgcttccgtcacgacgaatccatcgccgtcgacctcttcagcggcttcggcggg
ctcaccaagggcatcgaggacgccgggttcaccacgatcatggccgcgaaccacaacgcc
tacaaggtagaggtccacgaggcgaaccaccccgacgctgagcactggatcgccgacctc
gtcgacccggaggcctccgactaccactccgcccgcgatctccccgccgctgacctcctg
gcggcaggagtgagctgtgtcaaccactcactcgccaacacgatcaaggcgtatgagcag
ggcctgacactgttcgagctggaggaccccgactacgaggcacgcgtcaccaggtccgag
cgggaccgggccaccgccaactgcgtcctgcagtacgccgccaagcaccacccccggctg
atcctggtcgagtgcaccacccagctcacctcgtgggggcccgcgctgccgggccgcccg
aaggtcggggacggctcgacctaccggtggtggctcaagcagttcgacctgctcggctac
cggcacaaggtcctgtacctgaacagccagttcttcggagtcccccagtcccgggaccgc
ggctactgggtgttcgtcgacaagtccctgccgatgcccgacctggagcaccggccggtg
tcgcactgcgggcgctgcgacaaggacgtcgaggcggtgtggacgtggaagaccggcatc
ccggcgaccggcacggtgatgtacggcaagcagtacgaataccggtgcccgtcctgccgc
cggcccgtcgtcccgccgatgacgccgtcgctggccgcgctcgacctcagcgacctcggc
acgcgcatcggcgacaagccggtcaagacgttcagggacggcttcgtcgggccgctcgcg
cggtcgtcgatggcacgcgcggagcgctgccgccgccgcttcgccgacttcccggcgatc
ctcatgccggcgaagggtgtgcacggctcggagcggctcctgttgcagccgatggcgacg
cagaccagccagcaggagaccgcgatcctgtcgaccggatcggtcgtccagccgctgtgg
ggccgggacgccgctgacagaccggcgatggcactcgcggtcgacaacttccagggtgcc
gcgcgcggcgccgcggatccgctccccacccaggtcggatccgagaccctcgccgtgctg
tcctccggtgtcatcccgtaccggaagaacacgctgcccactctgcacagcgaggcgatg
cccaccttcacctcggagcagattccggcggtgctgacggccgccggctggtacaagcag
cacggtcccaccgggaacgagaccgcgcctcacccggtcacggacccgctcggcaccctc
acctcacgcgacacgaccgcgctgctcatggcccagtggcaggcgacgctcgccgagctg
ccgcttgaggactgcttctaccggatgatggcggcgcacgagatcggccgtggctgcggc
ttcgacgtcgacttcaacgactaccgcggcaccttcacggtctggggctccgcccgtaac
caggtcgacgggttcggcaacgccgtctccccgcaggtcggtacctggatcggctcccgg
ctgcgggccgtcctgcaccgggcggaggcggcatga
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