Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_p232
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Entry
SHJG_p232 CDS
T02063
Name
(GenBank) type IV secretory pathway, VirD4 component
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SHJG_p232
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Gene cluster
GFIT
Motif
Pfam:
TraG-D_C
T4SS-DNA_transf
TrwB_AAD_bind
FliMN_C
Tox-ODYAM1
Motif
Other DBs
NCBI-ProteinID:
AEY94347
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Position
pSHJG2:29240..31654
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AA seq
804 aa
AA seq
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MPYLSVQRRIQTGVAPVAHEELGGYCTTGAPTKGTFVNDNSKARDLIDSTGQPAVDQPAD
TDLAAAGKGWKPRNVLFASRPVLSRPTVRLTALTVPASLLAAETTTQDADADGLLGTVVG
GLANTVGTLFEQQPLLVTAMAVGLVGAGYLKLKGEFDVTREADGFAPKNQLRKALGARQL
VKKRGVLRPSLADVPARKVDTNAVGTYLGKDRKTGLHLYMAIEDSSVMVAPPGAGKTAKL
ANWIIDAPGAVLATSVKVDIVDLTEKLRARVGRILIWNPQNIGGRVSNVAWDPVIGCSDP
EHGVERAMRRANYLLDGSDATKGVENRSFWETASYSVLKSFLWAADAEGLTLLDVARWSK
SFRNTEAIEILEKYEHPDPSNPRRPVAPRGWKDSLVEVQKVEGKPTTGENVFGTLSKTFM
FLDSPQVQQVIEDAHKGGGLFDIRGYLQSQDTLYLLGRDTGRGGIGPLFSCLTGEIYEAA
RELAALQRGGRLDPPWSLILDEAALICSVPLEKWTADSRGLGIPIHAVFQSRSQIRDRYG
REAAKTVWTNMVKLVLGGLADEEDLKGLSELCGRHKEKRESYSTSPGPDGTMRQSSSYTW
VEVDTMTPADIMNLEPGEILVLRRNLGGPVVVRYTPVWERKDVKAVEKQQKKLAKSALTN
RLRKDTTVPTAPVEAAYAEDPADLWAPPEPASPWAPAAPSADPSPWTADPAASGWVSGPK
PGPRSHLQVVRGEVVPPMPEHPPVIPEQPDFAPTRHLEQVPVQPVPQEERPTAPVPLRKT
GTDDTEAPASDPYVYDDDDDLGGL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtacttgtcagtgcagcgacgtatacagacaggagtggccccggtggcgcatgaa
gagcttggcggctactgcaccaccggggcaccgacgaagggaaccttcgtgaacgacaac
agtaaggcccgtgacctgatcgactcgaccggccagcccgctgtcgaccagcccgcggac
accgacctggcggcggccgggaagggctggaagccgaggaacgtgctgttcgcctcccgc
ccggtcctctcccggcccaccgtgcgactgacggcgctgaccgtgccggccagcctgctc
gccgccgagacgacgacgcaggacgccgacgccgacgggctgctcggcaccgtcgtcggg
ggcctggccaacaccgttgggacactgttcgagcagcagccgctgctcgtgacggccatg
gccgtgggcttggtcggtgccggatacctgaagctgaagggtgaattcgatgtcacccgt
gaggccgacggtttcgcccccaagaaccagctgcgcaaggcgctcggtgcccgccagttg
gtcaagaagcgtggcgtgctgcgccccagcctggctgacgtcccggcccgcaaggtggac
accaacgcggtcggcacctacctgggcaaggaccgcaagacaggcctgcacctgtacatg
gccattgaggacagctccgtgatggtcgccccgcccggcgcgggcaagaccgcgaagctg
gcgaactggatcatcgacgctccgggcgcggtcctggcgacgtcggtgaaggtggacatc
gtcgacctgacggagaagctgcgcgcccgcgtcggccgcatcctgatctggaatccacag
aacatcggcggccgggtctcgaacgtggcctgggacccggtgatcggctgctccgacccg
gagcacggtgtcgagcgggcgatgcgccgcgccaattacctgctcgacggctccgacgcc
accaagggggtggagaaccgcagcttctgggagacggccagctacagcgtcctcaagtcg
ttcctgtgggccgccgacgccgaggggctgactctgctggacgtggcgcgctggtccaag
agcttccgcaacaccgaagccatcgagattctggaaaagtacgagcaccccgacccgtcc
aacccccgccgccccgtagccccgcgcggctggaaggacagcctggtcgaggtgcagaag
gtcgaaggcaagccgaccacgggcgaaaacgtcttcggcacgctgtccaagaccttcatg
ttcctggacagcccgcaggtacagcaggtgatcgaggacgcacacaagggcggcggcctc
ttcgacatccgcggctacctgcagtcgcaggacaccctgtacctcctcggccgcgacacc
ggccggggcggcatcggcccgctgttcagctgccttacgggcgagatctacgaagcggcc
cgggaactggcggccctgcagcgcggcgggcggctggaccctccctggtcgctgatcctc
gacgaagcggccctcatctgctcggtgccgctggagaagtggactgcggacagccgtggc
ctgggcatcccgatccacgccgtgttccagtcgcgctcgcagatcagggaccggtacggc
cgtgaggcggcgaagacggtctggaccaacatggtcaagctcgtacttggcggcctggcc
gacgaagaggacctcaagggcctgtcggagctgtgcggccggcacaaggagaagcgggag
tcgtactcgacctctccgggcccggacggcacgatgcgccagtcctcctcgtacacctgg
gtcgaggtcgacaccatgacgccggcggacatcatgaacctggagccgggcgagatcctg
gttctgcgccgcaacctcggcggcccggtcgtcgtgcgctacaccccggtgtgggagcgc
aaggacgtcaaggccgtggagaagcagcagaagaagctcgccaagtcggcgttgacgaac
cgtctgcgcaaggacaccacggtgcccaccgcgcctgtggaggcggcttacgccgaggat
ccggcggacctgtgggcgccgccggagcctgccagcccgtgggcgccggcggccccgtct
gcggaccccagcccgtggacggcggacccggctgccagcggctgggtctccggtccgaag
cccggcccgcgtagccacctgcaggtcgtgcgcggcgaggtggtcccgccgatgccggag
cacccgccggtgatccccgagcagccggacttcgccccgacccggcacctggagcaggtc
cccgtgcagccggtgccgcaggaggagcggccgaccgcgccggtgccgctgcgcaagacc
ggcaccgacgacaccgaagcccctgcctccgacccttacgtctacgacgacgatgacgac
ctgggcggcctgtga
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