Sphingobium xenophagum: CJD35_00160
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Entry
CJD35_00160 CDS
T05146
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shyd03009
]
CJD35_00160
Enzymes [BR:
shyd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CJD35_00160
Ribosome biogenesis [BR:
shyd03009
]
Prokaryotic type
ribosomal protein modification factors
CJD35_00160
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ASY45574
UniProt:
A0A249MWN2
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Position
I:35365..36732
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AA seq
455 aa
AA seq
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MATKFPDAPKIGMVSLGCPKNLVDSERILTKLRSDGYQMSADYAGADVVLVNTCGFLDSA
KEESLEAIGEAMAENGRVIVTGCMGDEADLIRAKFPQVLAVTGAHQYEQVVNAVHDASPP
VPNAFVDLVPEGGLKLTPRHYSYLKISEGCNHRCSFCIIPSIRGDLVSRRIDAVLREAEK
LVAAGTRELLVISQDTSAYGVDTRHEARSWKGRDVRAHMTDMARELGQLRTAEGRAPWVR
LHYVYPYPHVDQVIPLMADGLLTPYLDIPFQHAAPSVLKAMKRPANEAKVLDRIHKWRSI
CPDITIRSTFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEGAAANALPGAVPEE
VKEERYQRIMEKTAAISAAKLSAKVGRVLPVIVDEVGEPDEEDGSIGATARSQADAPEID
GNVFLRDVGEGRKAGDMIDVAIEDADEHDLYGVPV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaatttcctgacgcgccgaaaatcggcatggtttcgctcggctgtcccaaa
aacctggtggacagcgaacgcatcctgacgaagctgcgctccgacggctatcagatgtcc
gccgactatgccggcgccgacgtcgtgctggtcaatacgtgcggctttctcgattcggcc
aaggaggaatcgctggaagcgatcggcgaggcgatggccgaaaatggccgcgtcatcgtg
acgggctgcatgggggatgaggcggacctgatccgcgcgaaattcccgcaagtgctggcc
gtcaccggcgcgcatcaatatgagcaggtcgtcaacgcggtgcatgacgcatcgccgccc
gtccccaacgcctttgtcgatctggtgcccgaaggcgggctgaaactgacgccgcgccat
tacagctatctgaagatttccgaaggctgcaaccatcgctgctccttctgcatcatcccc
tcgatccggggcgatctggtgtcgcggcggatcgacgcggtgctgcgcgaggcggagaag
ctggtcgcggcggggaccagggaattgctggtgatcagccaggacacgtcggcctatggc
gtcgatacgcggcatgaggcgcggtcgtggaaaggccgcgacgtgcgcgcgcacatgacc
gacatggcgcgcgaactggggcagctgcgcaccgccgaagggcgcgcgccctgggtacgg
ctgcactatgtctacccctacccccatgtcgatcaggtcatcccgctgatggccgacggg
ctgctgacgccctatctcgacattcccttccagcatgccgcccccagcgtattgaaggcg
atgaaacgcccggccaatgaagccaaggtgctggaccgcatccataaatggcgcagcatc
tgcccggacatcaccatccgctcgaccttcgtggtcggcttccccggtgagacagaggcg
gatttccaatatctgctcgactggctggatgaagcgcaactcgaccgtgtcggcgcgttc
cgcttcgagccggtcgaaggcgcggcggccaacgccctgcccggcgcggtgcccgaagag
gtcaaggaagaacgctatcagcggatcatggaaaagaccgccgcgatcagcgccgccaag
ctctcggccaaggtcggccgcgtgctgccggtaatcgtcgatgaagtgggcgaaccggac
gaggaggacggctcgatcggcgcgactgcgcgctcacaggccgacgcgccggaaatcgac
ggcaatgtgttcctgcgcgatgtcggcgaagggcggaaggctggcgacatgatcgacgtc
gcaatcgaggatgccgacgagcatgatctctatggggtgccggtttaa
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