Sphingobium xenophagum: CJD35_00645
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Entry
CJD35_00645 CDS
T05146
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyd03016
]
CJD35_00645
Enzymes [BR:
shyd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CJD35_00645
Transfer RNA biogenesis [BR:
shyd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CJD35_00645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
VirionAssem_T7
Motif
Other DBs
NCBI-ProteinID:
ASY43127
UniProt:
A0A249MPS5
LinkDB
All DBs
Position
I:124660..126009
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AA seq
449 aa
AA seq
DB search
MNRPLPPKTPATFHVKSFGCQMNVYDGERMAEMLGERGMTAAADGNDADLVILNTCHIRE
KAVDKVYSDIGRMTREDGSRPMIAVAGCVAQAEGGEISRRARTVDIVVGPQAYHRLPDLI
AKAGRGEAAVDTDMPAESKFGALPARTKQARPTAFLTIMEGCDKFCTYCVVPYTRGAEIS
RSWGTILDEAKALVDGGVKEITLLGQNVNAWTGEDDKGRAQGMDGLVRELAKIDALKRIR
YTTSHPNDMSDGLIAAHGDVDKLMPFLHLPVQSGNDRILKAMNRSHSVEGYLRLIDRVRA
ARPDIALSGDFIVGFPGETEEEFADTLRIVDAVGYAQCYSFKYSPRPGTPAADMDGQIPA
DVMDDRLVRLQAAINRHQVGFNAATVGRRTTILLERAGRYPGQLIGKTPWLQSVHVTAPD
QAIGDMIEVDIISAGPNSLAGEIGRRKAA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcccctaccgcccaagactccagccaccttccacgtaaaatccttcggctgc
cagatgaacgtctatgatggcgaacgcatggccgagatgctgggcgagcggggcatgacc
gccgctgcggacgggaatgacgccgatctggtgatcctcaacacctgccacatccgcgaa
aaggcagtggacaaggtctattccgacattggccggatgacgcgcgaggatggcagccgc
ccgatgatcgcggtcgctggctgcgtcgcgcaggccgagggcggcgaaatcagccgccgc
gcccgaacggtggacatcgtcgtcggcccgcaggcctatcaccgcctgccggacctcatc
gcaaaggcgggtcgcggcgaagcggcggtcgataccgacatgccggcggaatcgaaattc
ggcgccctgcccgcccgcaccaagcaggcgcggcccaccgcctttctgacgatcatggaa
gggtgcgacaaattctgcacctattgcgtcgtcccctatacgcgcggcgcggaaatcagc
cggtcatggggcacgatcctcgacgaggcgaaggcgctggtggatggcggggtgaaggaa
atcacgctgctgggccagaatgtgaacgcctggaccggcgaggatgacaagggccgggca
cagggtatggacggtctggtccgggaactggcgaagatcgatgcgctcaagcgtatccgc
tatacgaccagccatcccaacgacatgagcgacgggctgatcgccgcccatggcgacgtc
gacaagctgatgcccttcctccatctgccggtgcaatcgggcaatgaccgcatcctcaag
gcgatgaaccgcagccatagcgtcgagggctatctgcgcctgatcgatcgcgtccgcgcg
gcgcgcccggacattgccctgtccggtgacttcatcgtcggcttccccggagagaccgag
gaggaatttgccgacacgctgcgcatcgtcgacgccgtgggctatgcgcaatgctattcg
ttcaaatatagcccccgccccggcacgccagcagccgacatggacgggcaaatacccgcc
gacgtcatggacgatcggctcgtgcggctacaggcggcgatcaatcgccatcaggtcggc
ttcaacgccgccacggtcggacgccgcaccaccatattgctggaacgcgcgggccgctat
cccggtcaattgatcggcaagacgccctggctgcaatccgttcacgtcaccgcccccgac
caggcgatcggcgatatgatagaggtcgacatcatcagcgccggtcccaatagtctggcc
ggcgaaattggcaggaggaaagccgcttga
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