Sphingobium xenophagum: CJD35_01265
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Entry
CJD35_01265 CDS
T05146
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shyd03021
]
CJD35_01265
03009 Ribosome biogenesis [BR:
shyd03009
]
CJD35_01265
Transcription machinery [BR:
shyd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CJD35_01265
Ribosome biogenesis [BR:
shyd03009
]
Prokaryotic type
rRNA transcription factors
CJD35_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
HHH_5
KH_2
KH_1
KH_NusA_C
KH_KhpA-B
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ASY43231
UniProt:
A0A249MPF6
LinkDB
All DBs
Position
I:complement(260889..262487)
Genome browser
AA seq
532 aa
AA seq
DB search
MANAISANRAELIAIANSVASEKMIDKAIVIEAMEDAIQRAARARYGAENDIRAKLDPDS
GDLRLWRVVEVVDVVEDYFKQVDIKAAQKLQKGAVVGDFIVDPLPPIDLGRIDAQSAKQV
IFQKVRDAERERQYEEFKDRVGEIITGVVKSVEFGHVVVNLGRAEGVIRRDQQIPREVVR
VGDRIRSVVLNVRRENRGPQIFLSRAHPEFMKKLFAQEVPEIYDGVITIMAAARDPGSRA
KIGVISRDSSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSEDTATFVVNALQPAQVS
RVLIDEEEERIEVVVPDDQLSLAIGRRGQNVRLASQLTGKAIDIMTEADASEKRQKEFVT
RSEMFQNELDVDETLSQLLVAEGFGELEEVAYVSIDELASIEGFDDDLAGELQSRALEAL
ERREAASREERQALGVEDALADMPHLTEAMLVTLGKAGIKTLDDLADLATDELVQKKRVD
QRRRKTESAEDKGGILAAYGLSDEQGNEIIMAARAHWFEDDASASGLENEEA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgccatttccgccaaccgggccgaactgatcgccatcgccaattcggtggcc
agcgaaaagatgatcgacaaggcgatcgtcatcgaggcgatggaggacgcgatccagcgc
gctgcgcgggcgcgttacggcgccgagaatgacattcgcgccaagctggaccccgacagc
ggcgacctgcgcctgtggcgcgtcgtcgaagtggtcgatgtggtcgaggattatttcaag
caggtcgacatcaaggccgcgcaaaagttgcagaagggcgcagtcgtcggcgatttcatc
gtcgatccgctgccccccatcgacctgggccgcatcgacgcccagtcggccaagcaggtg
atcttccagaaggtccgcgatgccgagcgcgagcgtcagtatgaggaattcaaggaccgc
gtgggtgaaatcatcaccggcgtcgtgaaatcggtcgagttcggccatgttgtcgtcaat
ctgggccgggccgaaggcgtcatccgccgcgaccagcagatcccgcgcgaagtcgtccgc
gttggcgatcgcatccggtcggtcgtgctgaacgtgcgccgcgaaaatcgcgggccgcag
attttcctgtcccgcgcgcaccccgaattcatgaaaaagctgttcgcgcaggaagtgccc
gaaatctatgatggcgtcatcaccatcatggccgccgcgcgcgatccgggcagccgcgcc
aagatcggcgtgatcagccgcgattcgagcatcgatccggtcggcgcctgcgtcggcatg
aagggcagccgcgtgcaggccgtcgtgcaggaaatgcagggcgaaaagatcgacatcatc
ccttggtcggaagatacggcaaccttcgtcgtcaacgcgcttcagcccgcccaggtcagc
cgcgtgctgatcgacgaggaagaagagcggatcgaagtcgtcgttcccgacgatcagctg
tcgctcgccatcggtcgtcgcggccagaatgtccgcctcgccagccagctgaccggcaag
gcgatcgacatcatgaccgaagccgacgccagcgagaagcggcagaaggaattcgtcacc
cggtccgaaatgttccagaacgaactggacgtggacgagacgctgtcgcagctgctggtg
gccgagggctttggcgagctggaagaagtcgcctatgtcagcattgacgaactggcctcg
atcgaaggctttgacgatgatctggcgggcgaattgcagagccgcgcgcttgaggcgctg
gagcggcgcgaagcagcgtcgcgggaagaacggcaggctctgggcgtcgaggatgccctg
gccgacatgccgcaccttaccgaagcgatgctggtgacgctgggcaaggcgggcatcaag
acgctcgacgatctggcagaccttgccaccgacgaactggtgcagaagaagcgcgtcgac
cagcgccgccgcaagaccgaaagcgccgaggacaagggtggcattttggccgcctatggc
ctgtcggacgagcagggcaatgagatcatcatggccgcccgcgcgcattggtttgaagat
gacgcatccgcgtcggggctcgagaacgaggaagcctga
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