Sphingobium xenophagum: CJD35_01625
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Entry
CJD35_01625 CDS
T05146
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00020
Citrate cycle (TCA cycle)
shyd00190
Oxidative phosphorylation
shyd00650
Butanoate metabolism
shyd00720
Other carbon fixation pathways
shyd01100
Metabolic pathways
shyd01110
Biosynthesis of secondary metabolites
shyd01120
Microbial metabolism in diverse environments
shyd01200
Carbon metabolism
Module
shyd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shyd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shyd_M00149
Succinate dehydrogenase, prokaryotes
shyd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CJD35_01625
00650 Butanoate metabolism
CJD35_01625
09102 Energy metabolism
00190 Oxidative phosphorylation
CJD35_01625
00720 Other carbon fixation pathways
CJD35_01625
Enzymes [BR:
shyd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CJD35_01625
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer2
Fer4_9
CCER1
Motif
Other DBs
NCBI-ProteinID:
ASY43293
UniProt:
A0A249MPK9
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All DBs
Position
I:complement(334232..335020)
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AA seq
262 aa
AA seq
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MAEFALPKNSKISGKGVTHPAPAGATKVRSFKVYRYDPDSGQNPRYDTYEIDLDNCGPMV
LDALIKIKNEYDPTLTFRRSCREGICGSCSMNMNGKNGLACTTAIEECSGKDVRITPLPH
MDVIKDLVPDFTHFYAQYNSIQPWLKTVSPPPSGKERLQSPADREKLDGLYECILCACCS
TSCPSYWWNSDKFLGPAILLQAYRWLADSRDEYTGDRLDELEDPFRLYRCHTIMNCANVC
PKGLSPAKAIAETKKMMVERQL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatttgcgttgcccaagaacagcaagatcagcggcaagggtgtgacccacccc
gcacccgcaggcgcgacgaaggtgcgcagcttcaaggtgtatcgctacgatcccgactcc
gggcagaacccgcgttacgacacctatgagattgatctcgacaattgcggcccgatggtt
ctggacgcgctgatcaagatcaagaatgaatatgatccgacgctgacctttcgccggtcc
tgccgtgaagggatttgcggttcctgttcgatgaacatgaacggcaagaacgggctggcc
tgcaccaccgcgatcgaggaatgttcgggcaaggacgtgcggatcacgccgctgccgcat
atggatgtgatcaaggatctggttcctgatttcacccatttctacgcgcagtataattcg
atccagccctggctcaagaccgtgtcgccgccgccatcgggcaaggagcggctccagtcg
cccgccgatcgcgagaagctggacggcctttacgaatgcatcctgtgcgcctgctgctcg
accagctgcccatcctactggtggaattcggacaagttcctcggcccggccatcctgttg
caggcctatcgctggctggcggacagccgcgatgaatataccggcgatcgtctcgacgaa
ctggaagatcccttccgcctgtatcgctgccacaccatcatgaactgcgcgaatgtctgc
cccaagggtctgtctccggccaaggcgatcgccgaaaccaagaagatgatggtcgagcgg
cagctctga
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