Sphingobium xenophagum: CJD35_02000
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Entry
CJD35_02000 CDS
T05146
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJD35_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shyd03400
]
CJD35_02000
Enzymes [BR:
shyd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
CJD35_02000
DNA repair and recombination proteins [BR:
shyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJD35_02000
RecFOR pathway proteins
CJD35_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
ASY43362
UniProt:
A0A249MPY1
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All DBs
Position
I:complement(416158..416649)
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AA seq
163 aa
AA seq
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MILLGLDPGLGTTGWGLIAADGNRLTHLGNGQIKTDSAMPLATRLLALDLALTDLILEHR
PDGAAVEEVFVNVNPQSTLKLGQARGVILLNAARSGMEVGEYAARLIKKSVVGVGNASKD
QVHAMVSRLLPGVKIVGPDAADALAVAITHAHHLASARRIPTR
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgatcctccttggtctcgaccccggccttggcaccaccggctggggtctgatcgccgct
gacggcaaccgcctcacgcatctgggcaatggccagatcaagacggatagcgcgatgcca
ctggcaacgcggctgctggcgctcgatcttgccctgaccgacctcatcctcgaacatcgg
cccgatggcgcggcggtcgaggaggtgttcgtcaacgtcaatccgcaatcgaccctgaaa
ctgggacaggcgcgcggcgtgatcctgctcaacgccgcgcgctccggcatggaggtcggc
gaatatgccgcgcggctgatcaagaaatccgtggtcggcgtcggcaatgcgtcgaaggat
caggtccatgccatggtgtcacgcctgttgcccggcgtgaagatcgtcgggcctgacgcc
gcggacgcgctcgccgtcgccatcacccacgcccatcatctcgccagcgcgcggcgcatt
ccgacgcggtag
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