Sphingobium xenophagum: CJD35_02885
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Entry
CJD35_02885 CDS
T05146
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shyd01011
]
CJD35_02885
Enzymes [BR:
shyd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CJD35_02885
Peptidoglycan biosynthesis and degradation proteins [BR:
shyd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CJD35_02885
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
ASY43516
UniProt:
A0A249MQ92
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All DBs
Position
I:588699..590786
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AA seq
695 aa
AA seq
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MSSMATPRMIESYIIRMPLVALLLFTAGASAQTEGPAPASAPADPPGAVVQPLPAQDTPG
AQWNRVASRVGMASDGTIGATIDQWRALQQSDGLGFSTYASFITANPGWPGEDRMRRLAE
TGINPDSYDPRQVTAFFARFPPRTATGHARNATALMQMGRTDEARVAARNAWISGSLSAA
DEARLLSLFGSGLTPADHDLRADMLLWANDTVGATRMLAYVSPGRRAVYQARIAFRRKSA
DAAMLMQAAEPVGASDAGFIADKALWLRDSGNWVAARQYLANRGPLSYRPTNVEKFYEIL
LGQARAAANDSQWSFAWGIASKIDDAVPPGVDLSDQPIGVRDDYTSLAWLAGTTAFYNLN
RPTDAVAMFRRYADAAKSPQTRSKGYYWAGRAALQAGDAASANGYFTQAGVYPDQFYGQL
ALERLGRPIPAPATVERPVPISAAERAAFDQRSVVRAVKALGQMGYWQDQGKFARAIANN
ADSDTDHYLAAELAEKIGRTDMSVMVGRRAVSSGLTGYGESAFPRVPVPPTAQYNWTMVH
AIARQESQFDKQIVSHAGARGLMQLMPGTAREQAGKLGLGYNPASLNDPSYNIMLGSGYF
QRMLDYYGGSYPLAVAAYNAGPGNVNKWIRANGDPRLPGADMLRWIEQIPIFETRNYVQR
VLENAVVYEAMNPERAKFRGTSAVLSRYLGKQTPG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatggcgacgccccgaatgattgaaagttacattatccgtatgccccttgtt
gcactgttgctgtttaccgccggcgcaagcgcccagaccgaaggcccagcccccgcgtca
gcgcccgccgacccgcccggcgccgtggtccagccgctgcccgcgcaggacacgccgggg
gcgcaatggaacagggtggcgtcccgcgtcggcatggccagcgacggcacgatcggcgcg
acgatcgaccagtggcgcgcgctgcagcaaagcgacgggctgggcttttccacctatgca
agcttcatcaccgccaatccgggctggccgggtgaggacaggatgcggcggctggccgaa
accggcatcaatcctgacagctatgatccccggcaggtcacggccttcttcgcccggttc
ccgccgcgcaccgcgaccggccacgcccgcaacgccaccgcgctgatgcagatggggcgg
acggacgaagcgcgggtcgccgcgcgcaatgcctggattagcggcagcctgagcgctgcg
gacgaagcgcgattgctgtctctcttcgggtccggcctgacgcctgccgatcacgacctg
cgcgccgacatgctgctgtgggccaacgacacggtcggggcgacgcgcatgctggcctat
gtctcgccgggcaggcgcgccgtctatcaggcgcgcatcgccttccgccgcaagtcggcc
gacgctgcgatgctgatgcaggccgccgaaccagttggcgcgagcgatgcaggctttatc
gccgacaaggcgttgtggctgcgcgacagcggcaactgggtcgcggcacgccaatatctc
gccaatcgcggcccgctcagctatcgcccgaccaacgtcgagaaattctacgaaatattg
ctgggacaggcgcgcgccgcggccaatgacagccagtggagctttgcctggggcatcgcc
agcaagattgacgatgccgtgccgccgggcgtcgacctgtccgaccagccgatcggcgtg
cgggacgattataccagtcttgcctggctggccgggacgaccgccttctacaatctcaat
cgtccgaccgacgcggtggcgatgttccgccgctatgccgatgcggccaaatcgccccag
accaggtcgaaaggctattattgggccggtcgcgccgcgcttcaggcgggcgacgccgcc
agcgccaacggctatttcacacaggcgggcgtctatcccgaccagttttacggtcagctg
gcgctcgaacggctgggccgcccgatccccgcgcccgccacggtcgagcgcccggtgccg
atttccgccgccgaacgcgccgcgttcgaccagcgatccgtcgttcgcgcggtcaaggcg
ctggggcagatgggctattggcaggatcagggcaaattcgcccgcgccatcgccaacaat
gccgacagcgacaccgatcattatctcgccgcggaactggccgaaaagatcggccgcacc
gacatgagcgtcatggtcggccgtcgcgccgtttccagcggcctgaccggctatggcgaa
agcgccttcccgcgcgtgcccgtgccgcccacggcgcaatataactggaccatggtgcat
gccatcgcccggcaggaaagccagttcgacaagcagatcgtcagccatgcaggcgcgcgc
ggactgatgcagctgatgcccggcacggcgcgcgaacaggcgggcaagctgggtctgggc
tacaatcccgcctcgctcaacgatcccagctacaatatcatgctgggttcgggctatttc
cagcggatgctggactattatggcggcagctatccgctggcggtcgcggcctataatgcc
gggccgggcaatgtgaacaagtggatccgcgccaatggcgacccgcgcctgcccggagcg
gacatgcttcgctggatcgagcagatcccgattttcgagacccgcaactatgtgcagcgg
gtgctggaaaatgcggtcgtctatgaagcaatgaacccggaacgggcgaaatttcgcggg
accagcgcggtgctgagccgctatctggggaaacagacgccgggttga
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