Sphingobium xenophagum: CJD35_03975
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Entry
CJD35_03975 CDS
T05146
Name
(GenBank) tRNA 2-thiouridine(34) synthase MnmA
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CJD35_03975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyd03016
]
CJD35_03975
Enzymes [BR:
shyd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
CJD35_03975
Transfer RNA biogenesis [BR:
shyd03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
CJD35_03975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
NAD_synthase
QueC
Arginosuc_synth
ThiI
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ASY43704
UniProt:
A0A249MR62
LinkDB
All DBs
Position
I:804573..805694
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AA seq
373 aa
AA seq
DB search
MQPEFQLAQFQLAGPLDARRIVVAMSGGVDSSVVAALAAKTGAEVIGVTLQLYDHGAAVG
RTGSCCAGQDIRDARAVADRIGIAHYVFDYESRFRESVIADFADEYMAGRTPIPCVKCNM
GVKFTDLFQIARDLGADCLATGHYVRRVEGPQGAELHRAADPARDQSYFLFATTQAQLDY
LRFPLGALPKPQVREIAAELGLAVALKPDSQDICFVPDGDYAKIVRKLRPDADEGGDIVH
VDGRVLGRHKGMIHFTVGQRKGLEIGGQPDPLYVIRLDAAGKRVIVGPKAALAVSGATLT
DINWLGRDFAGPLTAKVRSMAKPVPARLVDGQLLFDAPEYGVAPGQAAVLYDGDHVLGGG
WIASTQSAMAEVA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagagtttcagctagcccaattccagttggcaggtccgcttgacgcgcggcgc
atcgtcgtcgccatgtccggcggcgtcgattcctcggtcgtcgccgcgctcgccgccaaa
accggcgcggaagtgatcggcgtcacgctccagctttacgatcatggcgcggcggttggc
cgcacgggaagttgctgcgccgggcaggacatacgcgacgcgcgcgccgtggcggaccgc
atcggcatcgcccattatgtgttcgattatgaaagccgctttcgcgaatccgtgattgcc
gactttgccgacgaatatatggccgggcgcacccctatcccttgcgtcaaatgcaatatg
ggggtgaaattcactgacctgttccagatcgcgcgcgaccttggggcagactgccttgcc
accggccattatgtccgccgggtggaggggccgcagggcgcagagttacaccgcgccgcc
gatcccgcccgcgaccagagctatttcctcttcgccaccacccaggcgcagcttgattat
ctgcgctttcccttgggcgccctgcccaagccgcaggtgcgcgaaatcgccgccgaactg
gggctggccgtagccttgaagcccgacagccaagacatctgcttcgtccccgacggcgat
tatgcgaaaatcgtgcgtaaactgcgccccgacgcggacgaaggcggcgacatcgtccat
gtcgatggccgcgtgctgggccggcacaagggcatgatccatttcaccgtcggccagcgc
aaggggctggaaatcggcggccagcccgatccgctctacgtcatccgcctggatgcggcg
ggcaagcgcgtgatcgtgggaccaaaggccgcactggcggtatcgggcgcgaccctcacc
gacatcaactggctgggccgcgactttgccgggccactgacggccaaggtgcggtctatg
gccaaacccgtgcccgcgcgactggtggacggacaactcctgttcgacgcccccgaatat
ggcgtcgcgccgggacaggcggctgtgctctatgacggcgaccatgtgctgggcggcggc
tggatcgccagcacgcagagcgcgatggcggaagtggcgtaa
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